MotifZN317.H12INVIVO.0.P.B
Gene (human)ZNF317
(GeneCards)
Gene synonyms (human)KIAA1588
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length20
ConsensusRRhWRACWRMWGAYWWYYbR
GC content42.58%
Information content (bits; total / per base)16.596 / 0.83
Data sourcesChIP-Seq
Aligned words455

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (9) 0.901 0.924 0.889 0.909 0.883 0.906 7.298 7.784 549.824 611.237
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.150
HGNCHGNC:13507
MGI
EntrezGene (human)GeneID:57693
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN317_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q96PQ6
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0180.020.0338.017.0
02341.022.069.023.0
03177.0103.050.0125.0
0478.027.058.0292.0
05138.014.0241.062.0
06371.030.029.025.0
075.0416.06.028.0
08350.010.034.061.0
0970.010.0355.020.0
1060.0359.012.024.0
11187.019.019.0230.0
1235.03.0409.08.0
13432.06.09.08.0
1414.0293.09.0139.0
1559.024.015.0357.0
1649.042.032.0332.0
1753.0261.019.0122.0
1830.048.040.0337.0
1944.0268.059.084.0
20313.047.050.045.0
PFM
ACGT
010.1760.0440.7430.037
020.7490.0480.1520.051
030.3890.2260.110.275
040.1710.0590.1270.642
050.3030.0310.530.136
060.8150.0660.0640.055
070.0110.9140.0130.062
080.7690.0220.0750.134
090.1540.0220.780.044
100.1320.7890.0260.053
110.4110.0420.0420.505
120.0770.0070.8990.018
130.9490.0130.020.018
140.0310.6440.020.305
150.130.0530.0330.785
160.1080.0920.070.73
170.1160.5740.0420.268
180.0660.1050.0880.741
190.0970.5890.130.185
200.6880.1030.110.099
PWM
ACGT
01-0.346-1.6781.08-1.828
021.089-1.589-0.491-1.547
030.437-0.098-0.8050.093
04-0.371-1.396-0.6610.935
050.191-2.0050.744-0.596
061.173-1.296-1.329-1.469
07-2.8711.287-2.728-1.362
081.115-2.302-1.177-0.612
09-0.477-2.3021.129-1.678
10-0.6281.14-2.142-1.508
110.492-1.725-1.7250.697
12-1.149-3.2371.27-2.493
131.325-2.728-2.393-2.493
14-2.0050.938-2.3930.198
15-0.644-1.508-1.9421.135
16-0.825-0.974-1.2351.062
17-0.7490.823-1.7250.069
18-1.296-0.845-1.0211.077
19-0.9290.849-0.644-0.298
201.004-0.865-0.805-0.907
Standard thresholds
P-value Threshold
0.001 2.97221
0.0005 4.04321
0.0001 6.32321