MotifZN304.H12INVIVO.0.P.C
Gene (human)ZNF304
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length31
ConsensusYChnCCCCMRKYvRRCCYTCAGATGAvWvYv
GC content55.47%
Information content (bits; total / per base)28.244 / 0.911
Data sourcesChIP-Seq
Aligned words868

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.937 0.946 0.925 0.934 0.92 0.932 12.654 13.219 504.567 589.602
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyUnclassified {2.3.4.0} (TFClass)
TFClass IDTFClass: 2.3.4.0.69
HGNCHGNC:13505
MGI
EntrezGene (human)GeneID:57343
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN304_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9HCX3
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0150.0538.037.0243.0
0240.0703.024.0101.0
03293.0210.041.0324.0
0476.076.0328.0388.0
0515.0681.039.0133.0
0612.0797.06.053.0
0738.0732.011.087.0
0819.0797.07.045.0
09644.0120.084.020.0
10158.081.0601.028.0
1138.099.0113.0618.0
1227.0455.028.0358.0
13301.0145.0368.054.0
14687.040.0110.031.0
15197.021.0623.027.0
1625.0708.085.050.0
1721.0754.07.086.0
1842.0130.017.0679.0
1911.0128.031.0698.0
207.0816.031.014.0
21699.019.065.085.0
2236.029.0781.022.0
23751.050.046.021.0
2418.019.026.0805.0
2557.042.0736.033.0
26774.033.045.016.0
2793.0251.0470.054.0
28510.067.072.0219.0
29168.0391.0231.078.0
3066.0587.035.0180.0
31485.0118.0191.074.0
PFM
ACGT
010.0580.620.0430.28
020.0460.810.0280.116
030.3380.2420.0470.373
040.0880.0880.3780.447
050.0170.7850.0450.153
060.0140.9180.0070.061
070.0440.8430.0130.1
080.0220.9180.0080.052
090.7420.1380.0970.023
100.1820.0930.6920.032
110.0440.1140.130.712
120.0310.5240.0320.412
130.3470.1670.4240.062
140.7910.0460.1270.036
150.2270.0240.7180.031
160.0290.8160.0980.058
170.0240.8690.0080.099
180.0480.150.020.782
190.0130.1470.0360.804
200.0080.940.0360.016
210.8050.0220.0750.098
220.0410.0330.90.025
230.8650.0580.0530.024
240.0210.0220.030.927
250.0660.0480.8480.038
260.8920.0380.0520.018
270.1070.2890.5410.062
280.5880.0770.0830.252
290.1940.450.2660.09
300.0760.6760.040.207
310.5590.1360.220.085
PWM
ACGT
01-1.4420.903-1.7320.112
02-1.6571.17-2.142-0.756
030.298-0.033-1.6340.398
04-1.035-1.0350.410.578
05-2.5731.138-1.682-0.485
06-2.7711.295-3.348-1.386
07-1.7071.21-2.847-0.902
08-2.3581.295-3.225-1.544
091.083-0.586-0.937-2.311
10-0.314-0.9731.014-1.997
11-1.707-0.776-0.6451.042
12-2.0310.736-1.9970.498
130.325-0.3990.525-1.368
141.147-1.657-0.672-1.901
15-0.096-2.2661.05-2.031
16-2.1031.177-0.925-1.442
17-2.2661.24-3.225-0.914
18-1.611-0.507-2.461.135
19-2.847-0.523-1.9011.163
20-3.2251.319-1.901-2.635
211.164-2.358-1.188-0.925
22-1.758-1.9641.275-2.223
231.236-1.442-1.523-2.266
24-2.407-2.358-2.0671.305
25-1.315-1.6111.216-1.841
261.266-1.841-1.544-2.515
27-0.8370.1450.769-1.368
280.85-1.158-1.0880.009
29-0.2540.5850.062-1.009
30-1.1730.99-1.785-0.185
310.8-0.603-0.127-1.061
Standard thresholds
P-value Threshold
0.001 -2.24239
0.0005 -0.77604
0.0001 2.37791