MotifZN282.H12INVIVO.0.P.B
Gene (human)ZNF282
(GeneCards)
Gene synonyms (human)HUB1
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length11
ConsensusGGdGYGGGAGv
GC content75.27%
Information content (bits; total / per base)12.356 / 1.123
Data sourcesChIP-Seq
Aligned words325

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 3 (15) 0.853 0.881 0.718 0.769 0.872 0.913 3.133 3.288 67.347 106.796
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF282-like {2.3.3.38} (TFClass)
TFClass IDTFClass: 2.3.3.38.1
HGNCHGNC:13076
MGI
EntrezGene (human)GeneID:8427
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN282_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9UDV7
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 3 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0125.08.0284.08.0
0222.014.0282.07.0
0387.042.0118.078.0
042.021.0297.05.0
0545.0138.03.0139.0
067.02.0307.09.0
078.05.0308.04.0
086.01.0315.03.0
09296.019.06.04.0
1045.08.0257.015.0
1154.0121.0135.015.0
PFM
ACGT
010.0770.0250.8740.025
020.0680.0430.8680.022
030.2680.1290.3630.24
040.0060.0650.9140.015
050.1380.4250.0090.428
060.0220.0060.9450.028
070.0250.0150.9480.012
080.0180.0030.9690.009
090.9110.0580.0180.012
100.1380.0250.7910.046
110.1660.3720.4150.046
PWM
ACGT
01-1.14-2.171.239-2.17
02-1.26-1.6781.232-2.281
030.067-0.6440.368-0.04
04-3.178-1.3041.283-2.552
05-0.5770.523-2.9230.53
06-2.281-3.1781.316-2.069
07-2.17-2.5521.32-2.72
08-2.407-3.5211.342-2.923
091.28-1.397-2.407-2.72
10-0.577-2.171.14-1.615
11-0.40.3920.501-1.615
Standard thresholds
P-value Threshold
0.001 4.15964
0.0005 5.067255
0.0001 7.22231