| Motif | ZN282.H12INVITRO.0.P.D |
| Gene (human) | ZNF282 (GeneCards) |
| Gene synonyms (human) | HUB1 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZN282.H12INVITRO.0.P.D |
| Gene (human) | ZNF282 (GeneCards) |
| Gene synonyms (human) | HUB1 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 11 |
| Consensus | GGdGYGGGAGv |
| GC content | 75.27% |
| Information content (bits; total / per base) | 12.356 / 1.123 |
| Data sources | ChIP-Seq |
| Aligned words | 325 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 3 (15) | 0.853 | 0.881 | 0.718 | 0.769 | 0.872 | 0.913 | 3.133 | 3.288 | 67.347 | 106.796 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF282-like {2.3.3.38} (TFClass) |
| TFClass ID | TFClass: 2.3.3.38.1 |
| HGNC | HGNC:13076 |
| MGI | |
| EntrezGene (human) | GeneID:8427 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN282_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q9UDV7 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 3 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN282.H12INVITRO.0.P.D.pcm |
| PWM | ZN282.H12INVITRO.0.P.D.pwm |
| PFM | ZN282.H12INVITRO.0.P.D.pfm |
| Alignment | ZN282.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | ZN282.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZN282.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | ZN282.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | ZN282.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 25.0 | 8.0 | 284.0 | 8.0 |
| 02 | 22.0 | 14.0 | 282.0 | 7.0 |
| 03 | 87.0 | 42.0 | 118.0 | 78.0 |
| 04 | 2.0 | 21.0 | 297.0 | 5.0 |
| 05 | 45.0 | 138.0 | 3.0 | 139.0 |
| 06 | 7.0 | 2.0 | 307.0 | 9.0 |
| 07 | 8.0 | 5.0 | 308.0 | 4.0 |
| 08 | 6.0 | 1.0 | 315.0 | 3.0 |
| 09 | 296.0 | 19.0 | 6.0 | 4.0 |
| 10 | 45.0 | 8.0 | 257.0 | 15.0 |
| 11 | 54.0 | 121.0 | 135.0 | 15.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.077 | 0.025 | 0.874 | 0.025 |
| 02 | 0.068 | 0.043 | 0.868 | 0.022 |
| 03 | 0.268 | 0.129 | 0.363 | 0.24 |
| 04 | 0.006 | 0.065 | 0.914 | 0.015 |
| 05 | 0.138 | 0.425 | 0.009 | 0.428 |
| 06 | 0.022 | 0.006 | 0.945 | 0.028 |
| 07 | 0.025 | 0.015 | 0.948 | 0.012 |
| 08 | 0.018 | 0.003 | 0.969 | 0.009 |
| 09 | 0.911 | 0.058 | 0.018 | 0.012 |
| 10 | 0.138 | 0.025 | 0.791 | 0.046 |
| 11 | 0.166 | 0.372 | 0.415 | 0.046 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.14 | -2.17 | 1.239 | -2.17 |
| 02 | -1.26 | -1.678 | 1.232 | -2.281 |
| 03 | 0.067 | -0.644 | 0.368 | -0.04 |
| 04 | -3.178 | -1.304 | 1.283 | -2.552 |
| 05 | -0.577 | 0.523 | -2.923 | 0.53 |
| 06 | -2.281 | -3.178 | 1.316 | -2.069 |
| 07 | -2.17 | -2.552 | 1.32 | -2.72 |
| 08 | -2.407 | -3.521 | 1.342 | -2.923 |
| 09 | 1.28 | -1.397 | -2.407 | -2.72 |
| 10 | -0.577 | -2.17 | 1.14 | -1.615 |
| 11 | -0.4 | 0.392 | 0.501 | -1.615 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.15964 |
| 0.0005 | 5.067255 |
| 0.0001 | 7.22231 |