MotifZN273.H12INVIVO.0.P.C
Gene (human)ZNF273
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusSRGCYdCCShYYSYdGGbCYYCh
GC content68.08%
Information content (bits; total / per base)17.889 / 0.778
Data sourcesChIP-Seq
Aligned words973

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.822 0.839 0.77 0.807 0.843 0.849 7.402 7.858 120.926 157.398
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.155
HGNCHGNC:13067
MGI
EntrezGene (human)GeneID:10793
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN273_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q14593
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0155.0223.0643.052.0
02638.0137.0141.057.0
0349.067.0822.035.0
0458.0838.066.011.0
0523.0269.035.0646.0
06570.083.0206.0114.0
0723.0869.067.014.0
0841.0819.044.069.0
0987.0657.0116.0113.0
10451.0265.080.0177.0
1126.0775.074.098.0
1245.0201.098.0629.0
1333.0638.0192.0110.0
1462.0606.035.0270.0
15342.085.0444.0102.0
1628.067.0858.020.0
1773.085.0794.021.0
1837.0188.0424.0324.0
1927.0761.026.0159.0
2011.0446.025.0491.0
2112.0533.052.0376.0
2247.0830.041.055.0
2394.0434.076.0369.0
PFM
ACGT
010.0570.2290.6610.053
020.6560.1410.1450.059
030.050.0690.8450.036
040.060.8610.0680.011
050.0240.2760.0360.664
060.5860.0850.2120.117
070.0240.8930.0690.014
080.0420.8420.0450.071
090.0890.6750.1190.116
100.4640.2720.0820.182
110.0270.7970.0760.101
120.0460.2070.1010.646
130.0340.6560.1970.113
140.0640.6230.0360.277
150.3510.0870.4560.105
160.0290.0690.8820.021
170.0750.0870.8160.022
180.0380.1930.4360.333
190.0280.7820.0270.163
200.0110.4580.0260.505
210.0120.5480.0530.386
220.0480.8530.0420.057
230.0970.4460.0780.379
PWM
ACGT
01-1.463-0.0860.968-1.517
020.96-0.569-0.54-1.428
03-1.575-1.2711.213-1.898
04-1.4111.232-1.286-2.958
05-2.2940.1-1.8980.972
060.848-1.062-0.165-0.75
07-2.2941.268-1.271-2.746
08-1.7461.209-1.679-1.242
09-1.0160.989-0.733-0.759
100.6140.085-1.098-0.315
11-2.1791.154-1.174-0.899
12-1.657-0.189-0.8990.946
13-1.9540.96-0.235-0.785
14-1.3470.909-1.8980.104
150.339-1.0380.599-0.859
16-2.109-1.2711.255-2.423
17-1.187-1.0381.178-2.378
18-1.845-0.2560.5530.285
19-2.1441.136-2.179-0.421
20-2.9580.603-2.2160.699
21-2.8820.781-1.5170.433
22-1.6151.222-1.746-1.463
23-0.940.576-1.1480.414
Standard thresholds
P-value Threshold
0.001 2.43971
0.0005 3.56321
0.0001 5.96136