MotifZN260.H12CORE.0.P.C
Gene (human)ZNF260
(GeneCards)
Gene synonyms (human)ZFP260
Gene (mouse)Znf260
Gene synonyms (mouse)Zfp260
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusTTTdYATRGCTGYATARTATTCC
GC content35.2%
Information content (bits; total / per base)30.719 / 1.336
Data sourcesChIP-Seq
Aligned words869

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.904 0.915 0.91 0.923 0.912 0.921 14.545 15.105 354.77 388.252
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF146-like {2.3.3.55} (TFClass)
TFClass IDTFClass: 2.3.3.55.2
HGNCHGNC:13499
MGIMGI:1347071
EntrezGene (human)GeneID:339324
(SSTAR profile)
EntrezGene (mouse)GeneID:26466
(SSTAR profile)
UniProt ID (human)ZN260_HUMAN
UniProt ID (mouse)ZN260_MOUSE
UniProt AC (human)Q3ZCT1
(TFClass)
UniProt AC (mouse)Q62513
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0131.016.011.0811.0
0215.08.029.0817.0
0312.015.040.0802.0
04288.034.0144.0403.0
0570.0209.041.0549.0
06775.036.025.033.0
079.0221.07.0632.0
08185.010.0521.0153.0
0942.02.0815.010.0
100.0640.07.0222.0
1114.015.01.0839.0
1220.046.0780.023.0
13124.0617.01.0127.0
14693.04.0172.00.0
150.03.02.0864.0
16791.04.021.053.0
17131.0116.0612.010.0
1810.04.022.0833.0
19843.02.012.012.0
203.096.09.0761.0
214.03.05.0857.0
220.0835.00.034.0
2311.0820.02.036.0
PFM
ACGT
010.0360.0180.0130.933
020.0170.0090.0330.94
030.0140.0170.0460.923
040.3310.0390.1660.464
050.0810.2410.0470.632
060.8920.0410.0290.038
070.010.2540.0080.727
080.2130.0120.60.176
090.0480.0020.9380.012
100.00.7360.0080.255
110.0160.0170.0010.965
120.0230.0530.8980.026
130.1430.710.0010.146
140.7970.0050.1980.0
150.00.0030.0020.994
160.910.0050.0240.061
170.1510.1330.7040.012
180.0120.0050.0250.959
190.970.0020.0140.014
200.0030.110.010.876
210.0050.0030.0060.986
220.00.9610.00.039
230.0130.9440.0020.041
PWM
ACGT
01-1.902-2.516-2.8481.312
02-2.574-3.118-1.9651.319
03-2.772-2.574-1.6591.3
040.28-1.814-0.4070.614
05-1.116-0.038-1.6350.922
061.266-1.759-2.104-1.842
07-3.0190.017-3.2261.063
08-0.159-2.930.87-0.347
09-1.612-4.0831.316-2.93
10-4.8631.075-3.2260.021
11-2.636-2.574-4.3991.345
12-2.312-1.5241.273-2.182
13-0.5551.039-4.399-0.531
141.155-3.65-0.232-4.863
15-4.863-3.843-4.0831.375
161.287-3.65-2.267-1.387
17-0.501-0.6211.031-2.93
18-2.93-3.65-2.2241.338
191.35-4.083-2.772-2.772
20-3.843-0.807-3.0191.248
21-3.65-3.843-3.4881.367
22-4.8631.341-4.863-1.814
23-2.8481.323-4.083-1.759
Standard thresholds
P-value Threshold
0.001 -6.72769
0.0005 -4.88029
0.0001 -0.92684