| Motif | ZN257.H12INVITRO.0.P.D |
| Gene (human) | ZNF257 (GeneCards) |
| Gene synonyms (human) | BMZF4 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZN257.H12INVITRO.0.P.D |
| Gene (human) | ZNF257 (GeneCards) |
| Gene synonyms (human) | BMZF4 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 12 |
| Consensus | KhYCTTGCCTCh |
| GC content | 56.44% |
| Information content (bits; total / per base) | 13.773 / 1.148 |
| Data sources | ChIP-Seq |
| Aligned words | 827 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (7) | 0.837 | 0.868 | 0.785 | 0.815 | 0.816 | 0.873 | 3.591 | 3.717 | 265.06 | 327.921 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.139 |
| HGNC | HGNC:13498 |
| MGI | |
| EntrezGene (human) | GeneID:113835 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN257_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q9Y2Q1 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN257.H12INVITRO.0.P.D.pcm |
| PWM | ZN257.H12INVITRO.0.P.D.pwm |
| PFM | ZN257.H12INVITRO.0.P.D.pfm |
| Alignment | ZN257.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | ZN257.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZN257.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | ZN257.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | ZN257.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 48.0 | 67.0 | 604.0 | 108.0 |
| 02 | 251.0 | 370.0 | 49.0 | 157.0 |
| 03 | 8.0 | 195.0 | 143.0 | 481.0 |
| 04 | 99.0 | 723.0 | 5.0 | 0.0 |
| 05 | 4.0 | 4.0 | 0.0 | 819.0 |
| 06 | 1.0 | 92.0 | 3.0 | 731.0 |
| 07 | 20.0 | 8.0 | 681.0 | 118.0 |
| 08 | 1.0 | 826.0 | 0.0 | 0.0 |
| 09 | 2.0 | 819.0 | 0.0 | 6.0 |
| 10 | 147.0 | 2.0 | 47.0 | 631.0 |
| 11 | 39.0 | 707.0 | 33.0 | 48.0 |
| 12 | 282.0 | 140.0 | 83.0 | 322.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.058 | 0.081 | 0.73 | 0.131 |
| 02 | 0.304 | 0.447 | 0.059 | 0.19 |
| 03 | 0.01 | 0.236 | 0.173 | 0.582 |
| 04 | 0.12 | 0.874 | 0.006 | 0.0 |
| 05 | 0.005 | 0.005 | 0.0 | 0.99 |
| 06 | 0.001 | 0.111 | 0.004 | 0.884 |
| 07 | 0.024 | 0.01 | 0.823 | 0.143 |
| 08 | 0.001 | 0.999 | 0.0 | 0.0 |
| 09 | 0.002 | 0.99 | 0.0 | 0.007 |
| 10 | 0.178 | 0.002 | 0.057 | 0.763 |
| 11 | 0.047 | 0.855 | 0.04 | 0.058 |
| 12 | 0.341 | 0.169 | 0.1 | 0.389 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.434 | -1.11 | 1.067 | -0.642 |
| 02 | 0.193 | 0.578 | -1.414 | -0.273 |
| 03 | -3.07 | -0.058 | -0.365 | 0.84 |
| 04 | -0.728 | 1.246 | -3.441 | -4.821 |
| 05 | -3.603 | -3.603 | -4.821 | 1.371 |
| 06 | -4.354 | -0.8 | -3.796 | 1.257 |
| 07 | -2.263 | -3.07 | 1.186 | -0.555 |
| 08 | -4.354 | 1.379 | -4.821 | -4.821 |
| 09 | -4.037 | 1.371 | -4.821 | -3.301 |
| 10 | -0.338 | -4.037 | -1.454 | 1.11 |
| 11 | -1.634 | 1.224 | -1.793 | -1.434 |
| 12 | 0.308 | -0.386 | -0.901 | 0.44 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.288425 |
| 0.0005 | 4.509965 |
| 0.0001 | 6.972885 |