| Motif | ZN239.H12INVITRO.0.P.D |
| Gene (human) | ZNF239 (GeneCards) |
| Gene synonyms (human) | HOK2, MOK2 |
| Gene (mouse) | Znf239 |
| Gene synonyms (mouse) | Mok-2, Mok2, Zfp239 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZN239.H12INVITRO.0.P.D |
| Gene (human) | ZNF239 (GeneCards) |
| Gene synonyms (human) | HOK2, MOK2 |
| Gene (mouse) | Znf239 |
| Gene synonyms (mouse) | Mok-2, Mok2, Zfp239 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 28 |
| Consensus | nhYRCMSdMMYWvTCASWSMCWYdvhhd |
| GC content | 49.49% |
| Information content (bits; total / per base) | 18.328 / 0.655 |
| Data sources | ChIP-Seq |
| Aligned words | 400 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (6) | 0.836 | 0.88 | 0.803 | 0.858 | 0.848 | 0.895 | 9.907 | 10.283 | 91.569 | 221.0 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.83 |
| HGNC | HGNC:13031 |
| MGI | MGI:1306812 |
| EntrezGene (human) | GeneID:8187 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:22685 (SSTAR profile) |
| UniProt ID (human) | ZN239_HUMAN |
| UniProt ID (mouse) | ZN239_MOUSE |
| UniProt AC (human) | Q16600 (TFClass) |
| UniProt AC (mouse) | P24399 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN239.H12INVITRO.0.P.D.pcm |
| PWM | ZN239.H12INVITRO.0.P.D.pwm |
| PFM | ZN239.H12INVITRO.0.P.D.pfm |
| Alignment | ZN239.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | ZN239.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZN239.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | ZN239.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | ZN239.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 108.0 | 145.0 | 91.0 | 56.0 |
| 02 | 99.0 | 183.0 | 38.0 | 80.0 |
| 03 | 28.0 | 136.0 | 16.0 | 220.0 |
| 04 | 124.0 | 24.0 | 223.0 | 29.0 |
| 05 | 14.0 | 354.0 | 17.0 | 15.0 |
| 06 | 312.0 | 36.0 | 26.0 | 26.0 |
| 07 | 23.0 | 95.0 | 254.0 | 28.0 |
| 08 | 127.0 | 32.0 | 205.0 | 36.0 |
| 09 | 172.0 | 206.0 | 7.0 | 15.0 |
| 10 | 82.0 | 282.0 | 9.0 | 27.0 |
| 11 | 22.0 | 85.0 | 5.0 | 288.0 |
| 12 | 66.0 | 35.0 | 18.0 | 281.0 |
| 13 | 110.0 | 194.0 | 73.0 | 23.0 |
| 14 | 79.0 | 6.0 | 7.0 | 308.0 |
| 15 | 6.0 | 387.0 | 5.0 | 2.0 |
| 16 | 367.0 | 10.0 | 2.0 | 21.0 |
| 17 | 5.0 | 87.0 | 287.0 | 21.0 |
| 18 | 230.0 | 21.0 | 64.0 | 85.0 |
| 19 | 51.0 | 87.0 | 233.0 | 29.0 |
| 20 | 77.0 | 288.0 | 16.0 | 19.0 |
| 21 | 29.0 | 335.0 | 10.0 | 26.0 |
| 22 | 81.0 | 41.0 | 6.0 | 272.0 |
| 23 | 7.0 | 101.0 | 15.0 | 277.0 |
| 24 | 98.0 | 45.0 | 59.0 | 198.0 |
| 25 | 193.0 | 111.0 | 73.0 | 23.0 |
| 26 | 181.0 | 71.0 | 60.0 | 88.0 |
| 27 | 64.0 | 129.0 | 59.0 | 148.0 |
| 28 | 188.0 | 47.0 | 92.0 | 73.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.27 | 0.363 | 0.227 | 0.14 |
| 02 | 0.248 | 0.458 | 0.095 | 0.2 |
| 03 | 0.07 | 0.34 | 0.04 | 0.55 |
| 04 | 0.31 | 0.06 | 0.557 | 0.073 |
| 05 | 0.035 | 0.885 | 0.042 | 0.037 |
| 06 | 0.78 | 0.09 | 0.065 | 0.065 |
| 07 | 0.058 | 0.238 | 0.635 | 0.07 |
| 08 | 0.318 | 0.08 | 0.512 | 0.09 |
| 09 | 0.43 | 0.515 | 0.018 | 0.038 |
| 10 | 0.205 | 0.705 | 0.023 | 0.068 |
| 11 | 0.055 | 0.213 | 0.013 | 0.72 |
| 12 | 0.165 | 0.088 | 0.045 | 0.702 |
| 13 | 0.275 | 0.485 | 0.183 | 0.058 |
| 14 | 0.198 | 0.015 | 0.018 | 0.77 |
| 15 | 0.015 | 0.968 | 0.013 | 0.005 |
| 16 | 0.918 | 0.025 | 0.005 | 0.052 |
| 17 | 0.013 | 0.218 | 0.717 | 0.053 |
| 18 | 0.575 | 0.053 | 0.16 | 0.213 |
| 19 | 0.127 | 0.218 | 0.582 | 0.073 |
| 20 | 0.193 | 0.72 | 0.04 | 0.048 |
| 21 | 0.072 | 0.838 | 0.025 | 0.065 |
| 22 | 0.203 | 0.103 | 0.015 | 0.68 |
| 23 | 0.018 | 0.253 | 0.038 | 0.692 |
| 24 | 0.245 | 0.113 | 0.148 | 0.495 |
| 25 | 0.482 | 0.278 | 0.183 | 0.058 |
| 26 | 0.452 | 0.178 | 0.15 | 0.22 |
| 27 | 0.16 | 0.323 | 0.148 | 0.37 |
| 28 | 0.47 | 0.118 | 0.23 | 0.183 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.076 | 0.367 | -0.093 | -0.568 |
| 02 | -0.01 | 0.598 | -0.944 | -0.219 |
| 03 | -1.236 | 0.304 | -1.758 | 0.78 |
| 04 | 0.212 | -1.381 | 0.794 | -1.202 |
| 05 | -1.879 | 1.253 | -1.702 | -1.817 |
| 06 | 1.128 | -0.996 | -1.306 | -1.306 |
| 07 | -1.421 | -0.051 | 0.923 | -1.236 |
| 08 | 0.236 | -1.109 | 0.71 | -0.996 |
| 09 | 0.536 | 0.715 | -2.48 | -1.817 |
| 10 | -0.195 | 1.027 | -2.269 | -1.27 |
| 11 | -1.463 | -0.16 | -2.749 | 1.048 |
| 12 | -0.408 | -1.023 | -1.65 | 1.024 |
| 13 | 0.094 | 0.656 | -0.309 | -1.421 |
| 14 | -0.232 | -2.605 | -2.48 | 1.115 |
| 15 | -2.605 | 1.342 | -2.749 | -3.368 |
| 16 | 1.289 | -2.178 | -3.368 | -1.507 |
| 17 | -2.749 | -0.137 | 1.045 | -1.507 |
| 18 | 0.825 | -1.507 | -0.438 | -0.16 |
| 19 | -0.659 | -0.137 | 0.837 | -1.202 |
| 20 | -0.257 | 1.048 | -1.758 | -1.6 |
| 21 | -1.202 | 1.199 | -2.178 | -1.306 |
| 22 | -0.207 | -0.871 | -2.605 | 0.991 |
| 23 | -2.48 | 0.01 | -1.817 | 1.009 |
| 24 | -0.02 | -0.781 | -0.517 | 0.676 |
| 25 | 0.65 | 0.103 | -0.309 | -1.421 |
| 26 | 0.587 | -0.336 | -0.501 | -0.126 |
| 27 | -0.438 | 0.251 | -0.517 | 0.387 |
| 28 | 0.624 | -0.739 | -0.082 | -0.309 |
| P-value | Threshold |
|---|---|
| 0.001 | 2.33841 |
| 0.0005 | 3.48591 |
| 0.0001 | 5.92676 |