MotifZN223.H12INVIVO.0.P.C
Gene (human)ZNF223
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length16
ConsensusvdGGdGGYbCAGGYMv
GC content66.6%
Information content (bits; total / per base)13.991 / 0.874
Data sourcesChIP-Seq
Aligned words999

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (6) 0.847 0.87 0.763 0.79 0.907 0.926 4.123 4.358 173.727 231.301
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF222-like {2.3.3.47} (TFClass)
TFClass IDTFClass: 2.3.3.47.2
HGNCHGNC:13016
MGI
EntrezGene (human)GeneID:7766
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN223_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9UK11
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01488.0151.0279.081.0
02448.055.0329.0167.0
0367.025.0858.049.0
04112.041.0828.018.0
05275.024.0273.0427.0
0646.013.0930.010.0
07191.05.0801.02.0
08113.0426.026.0434.0
0979.0269.0551.0100.0
1017.0842.0134.06.0
11828.075.070.026.0
127.03.0979.010.0
1321.012.0948.018.0
14111.0691.064.0133.0
15589.0192.052.0166.0
16200.0198.0502.099.0
PFM
ACGT
010.4880.1510.2790.081
020.4480.0550.3290.167
030.0670.0250.8590.049
040.1120.0410.8290.018
050.2750.0240.2730.427
060.0460.0130.9310.01
070.1910.0050.8020.002
080.1130.4260.0260.434
090.0790.2690.5520.1
100.0170.8430.1340.006
110.8290.0750.070.026
120.0070.0030.980.01
130.0210.0120.9490.018
140.1110.6920.0640.133
150.590.1920.0520.166
160.20.1980.5030.099
PWM
ACGT
010.666-0.4990.11-1.112
020.581-1.4890.274-0.399
03-1.297-2.2421.229-1.601
04-0.794-1.7731.194-2.545
050.096-2.280.0880.533
06-1.662-2.8381.31-3.065
07-0.266-3.6211.161-4.212
08-0.7850.531-2.2050.55
09-1.1360.0740.788-0.905
10-2.5971.21-0.617-3.483
111.194-1.187-1.254-2.205
12-3.361-3.9741.361-3.065
13-2.404-2.9081.329-2.545
14-0.8021.013-1.342-0.624
150.854-0.261-1.543-0.405
16-0.22-0.230.695-0.915
Standard thresholds
P-value Threshold
0.001 3.53536
0.0005 4.59901
0.0001 6.81826