| Motif | ZN222.H12INVITRO.0.P.D |
| Gene (human) | ZNF222 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZN222.H12INVITRO.0.P.D |
| Gene (human) | ZNF222 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 12 |
| Consensus | dhvTCAGCMdvh |
| GC content | 54.06% |
| Information content (bits; total / per base) | 9.383 / 0.782 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (4) | 0.742 | 0.749 | 0.57 | 0.577 | 0.737 | 0.744 | 2.217 | 2.233 | 98.991 | 110.959 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF222-like {2.3.3.47} (TFClass) |
| TFClass ID | TFClass: 2.3.3.47.1 |
| HGNC | HGNC:13015 |
| MGI | |
| EntrezGene (human) | GeneID:7673 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN222_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q9UK12 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN222.H12INVITRO.0.P.D.pcm |
| PWM | ZN222.H12INVITRO.0.P.D.pwm |
| PFM | ZN222.H12INVITRO.0.P.D.pfm |
| Alignment | ZN222.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | ZN222.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZN222.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | ZN222.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | ZN222.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 493.0 | 59.0 | 277.0 | 171.0 |
| 02 | 106.0 | 106.0 | 35.0 | 753.0 |
| 03 | 162.0 | 397.0 | 354.0 | 87.0 |
| 04 | 40.0 | 8.0 | 143.0 | 809.0 |
| 05 | 11.0 | 768.0 | 177.0 | 44.0 |
| 06 | 862.0 | 60.0 | 7.0 | 71.0 |
| 07 | 9.0 | 7.0 | 969.0 | 15.0 |
| 08 | 2.0 | 974.0 | 7.0 | 17.0 |
| 09 | 232.0 | 634.0 | 17.0 | 117.0 |
| 10 | 261.0 | 60.0 | 266.0 | 413.0 |
| 11 | 181.0 | 382.0 | 331.0 | 106.0 |
| 12 | 384.0 | 316.0 | 133.0 | 167.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.493 | 0.059 | 0.277 | 0.171 |
| 02 | 0.106 | 0.106 | 0.035 | 0.753 |
| 03 | 0.162 | 0.397 | 0.354 | 0.087 |
| 04 | 0.04 | 0.008 | 0.143 | 0.809 |
| 05 | 0.011 | 0.768 | 0.177 | 0.044 |
| 06 | 0.862 | 0.06 | 0.007 | 0.071 |
| 07 | 0.009 | 0.007 | 0.969 | 0.015 |
| 08 | 0.002 | 0.974 | 0.007 | 0.017 |
| 09 | 0.232 | 0.634 | 0.017 | 0.117 |
| 10 | 0.261 | 0.06 | 0.266 | 0.413 |
| 11 | 0.181 | 0.382 | 0.331 | 0.106 |
| 12 | 0.384 | 0.316 | 0.133 | 0.167 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.676 | -1.422 | 0.102 | -0.377 |
| 02 | -0.849 | -0.849 | -1.925 | 1.098 |
| 03 | -0.43 | 0.46 | 0.346 | -1.043 |
| 04 | -1.797 | -3.253 | -0.553 | 1.17 |
| 05 | -2.985 | 1.118 | -0.342 | -1.706 |
| 06 | 1.233 | -1.406 | -3.362 | -1.242 |
| 07 | -3.156 | -3.362 | 1.35 | -2.711 |
| 08 | -4.213 | 1.355 | -3.362 | -2.598 |
| 09 | -0.074 | 0.926 | -2.598 | -0.752 |
| 10 | 0.043 | -1.406 | 0.062 | 0.499 |
| 11 | -0.32 | 0.422 | 0.279 | -0.849 |
| 12 | 0.427 | 0.233 | -0.625 | -0.4 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.89093 |
| 0.0005 | 5.695765 |
| 0.0001 | 7.297265 |