MotifZN211.H12INVITRO.0.P.D
Gene (human)ZNF211
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length13
ConsensusRTGGTATATRWdb
GC content29.9%
Information content (bits; total / per base)16.087 / 1.237
Data sourcesChIP-Seq
Aligned words186

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (10) 0.846 0.943 0.759 0.865 0.854 0.97 4.465 5.567 87.553 212.959
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyZNF417-like {2.3.4.1} (TFClass)
TFClass IDTFClass: 2.3.4.1.6
HGNCHGNC:13003
MGI
EntrezGene (human)GeneID:10520
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN211_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q13398
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01101.015.065.05.0
027.00.06.0173.0
038.00.0178.00.0
040.00.0186.00.0
050.00.01.0185.0
06181.01.03.01.0
070.02.00.0184.0
08174.01.011.00.0
092.05.018.0161.0
10115.016.052.03.0
1154.013.09.0110.0
1268.05.051.062.0
1324.057.028.077.0
PFM
ACGT
010.5430.0810.3490.027
020.0380.00.0320.93
030.0430.00.9570.0
040.00.01.00.0
050.00.00.0050.995
060.9730.0050.0160.005
070.00.0110.00.989
080.9350.0050.0590.0
090.0110.0270.0970.866
100.6180.0860.280.016
110.290.070.0480.591
120.3660.0270.2740.333
130.1290.3060.1510.414
PWM
ACGT
010.761-1.0760.327-2.026
02-1.75-3.6-1.8781.294
03-1.636-3.61.322-3.6
04-3.6-3.61.366-3.6
05-3.6-3.6-3.0311.36
061.339-3.031-2.407-3.031
07-3.6-2.671-3.61.355
081.299-3.031-1.357-3.6
09-2.671-2.026-0.9071.222
100.889-1.0160.109-2.407
110.146-1.206-1.5340.845
120.371-2.0260.090.281
13-0.6360.199-0.4890.493
Standard thresholds
P-value Threshold
0.001 2.72516
0.0005 3.92651
0.0001 6.473565