MotifZN205.H12INVITRO.0.P.D
Gene (human)ZNF205
(GeneCards)
Gene synonyms (human)ZNF210
Gene (mouse)Zfp13
Gene synonyms (mouse)Krox-8, Zfp-13
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length23
ConsensusdGAGYRYYhRvdvbvbvhnvRSh
GC content57.12%
Information content (bits; total / per base)11.531 / 0.501
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (7) 0.759 0.809 0.644 0.718 0.714 0.767 3.048 3.548 83.481 176.602
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.58
HGNCHGNC:12996
MGIMGI:99159
EntrezGene (human)GeneID:7755
(SSTAR profile)
EntrezGene (mouse)GeneID:22654
(SSTAR profile)
UniProt ID (human)ZN205_HUMAN
UniProt ID (mouse)ZFP13_MOUSE
UniProt AC (human)O95201
(TFClass)
UniProt AC (mouse)P10754
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01187.083.0217.0513.0
0224.0153.0814.09.0
03912.03.056.029.0
0446.020.0919.015.0
05122.0591.078.0209.0
06343.023.0590.044.0
07102.0699.079.0120.0
08105.0559.029.0307.0
09522.0196.064.0218.0
10620.084.0230.066.0
1196.0504.0317.083.0
12218.0107.0151.0524.0
13501.0152.0238.0109.0
1497.0356.0155.0392.0
15205.0409.0300.086.0
16103.0123.0306.0468.0
17196.0350.0394.060.0
18159.0526.0109.0206.0
19208.0328.0190.0274.0
20495.0190.0210.0105.0
21200.055.0698.047.0
22106.0140.0702.052.0
23194.0552.089.0165.0
PFM
ACGT
010.1870.0830.2170.513
020.0240.1530.8140.009
030.9120.0030.0560.029
040.0460.020.9190.015
050.1220.5910.0780.209
060.3430.0230.590.044
070.1020.6990.0790.12
080.1050.5590.0290.307
090.5220.1960.0640.218
100.620.0840.230.066
110.0960.5040.3170.083
120.2180.1070.1510.524
130.5010.1520.2380.109
140.0970.3560.1550.392
150.2050.4090.30.086
160.1030.1230.3060.468
170.1960.350.3940.06
180.1590.5260.1090.206
190.2080.3280.190.274
200.4950.190.210.105
210.20.0550.6980.047
220.1060.140.7020.052
230.1940.5520.0890.165
PWM
ACGT
01-0.288-1.089-0.1410.715
02-2.281-0.4871.176-3.156
031.289-3.975-1.473-2.103
04-1.663-2.451.297-2.711
05-0.710.856-1.15-0.178
060.314-2.320.855-1.706
07-0.8871.024-1.137-0.727
08-0.8580.801-2.1030.204
090.733-0.241-1.343-0.136
100.904-1.077-0.083-1.313
11-0.9460.6980.236-1.089
12-0.136-0.84-0.50.736
130.692-0.493-0.049-0.821
14-0.9360.351-0.4740.447
15-0.1970.490.181-1.054
16-0.877-0.7020.2010.624
17-0.2410.3350.452-1.406
18-0.4490.74-0.821-0.192
19-0.1830.27-0.2720.091
200.68-0.272-0.173-0.858
21-0.221-1.491.022-1.642
22-0.849-0.5741.028-1.544
23-0.2520.788-1.02-0.412
Standard thresholds
P-value Threshold
0.001 4.39196
0.0005 5.25291
0.0001 7.06056