MotifZN177.H12INVIVO.0.SM.D
Gene (human)ZNF177
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length24
ConsensusnhWSRbbdbbvvbYKMGATCdAvn
GC content48.56%
Information content (bits; total / per base)13.235 / 0.551
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words9848

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.822 0.835 0.641 0.675 0.559 0.596
best 0.889 0.893 0.683 0.714 0.58 0.62
Methyl HT-SELEX, 1 experiments median 0.754 0.776 0.599 0.636 0.537 0.572
best 0.754 0.776 0.599 0.636 0.537 0.572
Non-Methyl HT-SELEX, 1 experiments median 0.889 0.893 0.683 0.714 0.58 0.62
best 0.889 0.893 0.683 0.714 0.58 0.62
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF177-like {2.3.3.40} (TFClass)
TFClass IDTFClass: 2.3.3.40.1
HGNCHGNC:12966
MGI
EntrezGene (human)GeneID:100529215
(SSTAR profile)
GeneID:7730
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN177_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q13360
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
013372.52791.51565.52118.5
025509.01438.01377.01524.0
031026.0947.0762.07113.0
04905.01704.06370.0869.0
056264.01094.01513.0977.0
061031.05003.02092.01722.0
07721.03661.0739.04727.0
081844.01187.02957.03860.0
091467.01813.02476.04092.0
101490.01822.03447.03089.0
112402.05027.01370.01049.0
122550.04522.01562.01214.0
131228.03249.03242.02129.0
14844.03469.0415.05120.0
15670.0446.01558.07174.0
163077.06234.0106.0431.0
1793.0160.09540.055.0
189442.0154.0226.026.0
1988.02156.072.07532.0
20225.09219.090.0314.0
212408.0802.04450.02188.0
228230.0627.0470.0521.0
232805.01935.03909.01199.0
242426.252607.252386.252428.25
PFM
ACGT
010.3420.2830.1590.215
020.5590.1460.140.155
030.1040.0960.0770.722
040.0920.1730.6470.088
050.6360.1110.1540.099
060.1050.5080.2120.175
070.0730.3720.0750.48
080.1870.1210.30.392
090.1490.1840.2510.416
100.1510.1850.350.314
110.2440.510.1390.107
120.2590.4590.1590.123
130.1250.330.3290.216
140.0860.3520.0420.52
150.0680.0450.1580.728
160.3120.6330.0110.044
170.0090.0160.9690.006
180.9590.0160.0230.003
190.0090.2190.0070.765
200.0230.9360.0090.032
210.2450.0810.4520.222
220.8360.0640.0480.053
230.2850.1960.3970.122
240.2460.2650.2420.247
PWM
ACGT
010.3140.125-0.452-0.15
020.805-0.537-0.58-0.479
03-0.874-0.954-1.1711.06
04-0.999-0.3680.95-1.04
050.933-0.81-0.486-0.923
06-0.8690.709-0.163-0.357
07-1.2260.396-1.2010.652
08-0.289-0.7290.1830.449
09-0.517-0.3060.0060.508
10-0.502-0.3010.3360.227
11-0.0250.713-0.585-0.852
120.0350.608-0.454-0.706
13-0.6950.2770.275-0.145
14-1.0690.343-1.7760.732
15-1.299-1.704-0.4571.069
160.2230.928-3.125-1.738
17-3.253-2.721.354-3.761
181.344-2.758-2.379-4.467
19-3.307-0.133-3.5021.118
20-2.3831.32-3.285-2.053
21-0.022-1.120.592-0.118
221.206-1.365-1.652-1.55
230.13-0.2410.462-0.719
24-0.0150.057-0.031-0.014
Standard thresholds
P-value Threshold
0.001 3.81876
0.0005 4.82636
0.0001 6.92306