MotifZN174.H12INVIVO.0.M.D
Gene (human)ZNF174
(GeneCards)
Gene synonyms (human)ZSCAN8
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length17
ConsensusnbnGSCRAGTGATYGvY
GC content59.6%
Information content (bits; total / per base)19.757 / 1.162
Data sourcesMethyl-HT-SELEX
Aligned words9179

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Methyl HT-SELEX, 1 experiments median 1.0 1.0 0.999 0.999 0.955 0.957
best 1.0 1.0 0.999 0.999 0.955 0.957
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyOther with up to three adjacent zinc fingers {2.3.2} (TFClass)
TF subfamilySCAN {2.3.2.3} (TFClass)
TFClass IDTFClass: 2.3.2.3.2
HGNCHGNC:12963
MGI
EntrezGene (human)GeneID:7727
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN174_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q15697
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 1
PCM
ACGT
011327.52491.52795.52564.5
021034.52633.51879.53631.5
031727.01488.02916.03048.0
04294.0120.08437.0328.0
05397.01798.05848.01136.0
0635.09102.017.025.0
073426.0106.05535.0112.0
089142.06.030.01.0
09147.03.08858.0171.0
100.033.03.09143.0
1122.00.09153.04.0
129167.08.02.02.0
132.0945.07.08225.0
1424.06364.0227.02564.0
1574.07.09046.052.0
161571.01974.04641.0993.0
17996.05723.0800.01660.0
PFM
ACGT
010.1450.2710.3050.279
020.1130.2870.2050.396
030.1880.1620.3180.332
040.0320.0130.9190.036
050.0430.1960.6370.124
060.0040.9920.0020.003
070.3730.0120.6030.012
080.9960.0010.0030.0
090.0160.00.9650.019
100.00.0040.00.996
110.0020.00.9970.0
120.9990.0010.00.0
130.00.1030.0010.896
140.0030.6930.0250.279
150.0080.0010.9860.006
160.1710.2150.5060.108
170.1090.6230.0870.181
PWM
ACGT
01-0.5470.0820.1970.111
02-0.7950.138-0.1990.459
03-0.284-0.4330.2390.284
04-2.048-2.9331.301-1.939
05-1.75-0.2440.935-0.702
06-4.1211.377-4.78-4.433
070.4-3.0550.88-3.001
081.382-5.625-4.265-6.551
09-2.734-6.0751.35-2.584
10-6.915-4.176-6.0751.382
11-4.55-6.9151.383-5.902
121.384-5.409-6.285-6.285
13-6.285-0.886-5.5111.276
14-4.4711.019-2.3040.111
15-3.405-5.5111.371-3.745
16-0.378-0.150.704-0.836
17-0.8330.913-1.052-0.323
Standard thresholds
P-value Threshold
0.001 -2.41914
0.0005 -0.55939
0.0001 3.33616