MotifZN154.H12INVITRO.0.P.D
Gene (human)ZNF154
(GeneCards)
Gene synonyms (human)KIAA2003
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length31
ConsensushbvnddddRKvAGACCTMCYGGACdWRRACh
GC content51.55%
Information content (bits; total / per base)25.455 / 0.821
Data sourcesChIP-Seq
Aligned words52

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.918 0.978 0.917 0.974 0.929 0.992 9.403 10.777 113.737 122.387
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.126
HGNCHGNC:12939
MGI
EntrezGene (human)GeneID:7710
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN154_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q13106
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0115.019.06.012.0
026.024.010.012.0
0328.013.06.05.0
049.09.010.024.0
057.05.024.016.0
0610.05.028.09.0
0710.04.026.012.0
0824.05.016.07.0
098.01.038.05.0
103.04.037.08.0
1135.07.07.03.0
1242.00.010.00.0
133.00.049.00.0
1446.06.00.00.0
150.044.00.08.0
164.041.00.07.0
172.01.00.049.0
189.037.00.06.0
191.051.00.00.0
202.023.00.027.0
2123.00.029.00.0
224.01.046.01.0
2341.06.05.00.0
244.042.00.06.0
2523.04.09.016.0
2638.04.04.06.0
2739.01.08.04.0
289.04.034.05.0
2946.01.02.03.0
303.041.02.06.0
319.019.03.021.0
PFM
ACGT
010.2880.3650.1150.231
020.1150.4620.1920.231
030.5380.250.1150.096
040.1730.1730.1920.462
050.1350.0960.4620.308
060.1920.0960.5380.173
070.1920.0770.50.231
080.4620.0960.3080.135
090.1540.0190.7310.096
100.0580.0770.7120.154
110.6730.1350.1350.058
120.8080.00.1920.0
130.0580.00.9420.0
140.8850.1150.00.0
150.00.8460.00.154
160.0770.7880.00.135
170.0380.0190.00.942
180.1730.7120.00.115
190.0190.9810.00.0
200.0380.4420.00.519
210.4420.00.5580.0
220.0770.0190.8850.019
230.7880.1150.0960.0
240.0770.8080.00.115
250.4420.0770.1730.308
260.7310.0770.0770.115
270.750.0190.1540.077
280.1730.0770.6540.096
290.8850.0190.0380.058
300.0580.7880.0380.115
310.1730.3650.0580.404
PWM
ACGT
010.1340.357-0.694-0.074
02-0.6940.58-0.241-0.074
030.7290.0-0.694-0.848
04-0.337-0.337-0.2410.58
05-0.56-0.8480.580.194
06-0.241-0.8480.729-0.337
07-0.241-1.0310.657-0.074
080.58-0.8480.194-0.56
09-0.442-1.9511.025-0.848
10-1.255-1.0310.999-0.442
110.945-0.56-0.56-1.255
121.123-2.65-0.241-2.65
13-1.255-2.651.274-2.65
141.212-0.694-2.65-2.65
15-2.651.168-2.65-0.442
16-1.0311.099-2.65-0.56
17-1.544-1.951-2.651.274
18-0.3370.999-2.65-0.694
19-1.9511.313-2.65-2.65
20-1.5440.539-2.650.694
210.539-2.650.763-2.65
22-1.031-1.9511.212-1.951
231.099-0.694-0.848-2.65
24-1.0311.123-2.65-0.694
250.539-1.031-0.3370.194
261.025-1.031-1.031-0.694
271.05-1.951-0.442-1.031
28-0.337-1.0310.917-0.848
291.212-1.951-1.544-1.255
30-1.2551.099-1.544-0.694
31-0.3370.357-1.2550.452
Standard thresholds
P-value Threshold
0.001 0.97631
0.0005 2.23286
0.0001 4.92011