MotifZN148.H12CORE.0.P.B
Gene (human)ZNF148
(GeneCards)
Gene synonyms (human)ZBP89
Gene (mouse)Znf148
Gene synonyms (mouse)Zbp89, Zfp148
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length19
ConsensusvvdRnWGGGGGMRGGGvdv
GC content74.41%
Information content (bits; total / per base)19.896 / 1.047
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (12) 0.929 0.952 0.827 0.887 0.97 0.983 5.793 6.132 304.743 411.201
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF148-like {2.3.3.13} (TFClass)
TFClass IDTFClass: 2.3.3.13.1
HGNCHGNC:12933
MGIMGI:1332234
EntrezGene (human)GeneID:7707
(SSTAR profile)
EntrezGene (mouse)GeneID:22661
(SSTAR profile)
UniProt ID (human)ZN148_HUMAN
UniProt ID (mouse)ZN148_MOUSE
UniProt AC (human)Q9UQR1
(TFClass)
UniProt AC (mouse)Q61624
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01164.0224.0449.0163.0
02217.0160.0500.0123.0
03174.0124.0576.0126.0
04185.091.0644.080.0
05135.0130.0600.0135.0
06172.052.0104.0672.0
072.00.0996.02.0
081.00.0999.00.0
0913.01.0983.03.0
104.00.0989.07.0
110.01.0999.00.0
12732.0138.08.0122.0
13179.00.0682.0139.0
140.01.0998.01.0
158.05.0984.03.0
1621.08.0952.019.0
17465.0282.0151.0102.0
18320.093.0487.0100.0
19178.0210.0517.095.0
PFM
ACGT
010.1640.2240.4490.163
020.2170.160.50.123
030.1740.1240.5760.126
040.1850.0910.6440.08
050.1350.130.60.135
060.1720.0520.1040.672
070.0020.00.9960.002
080.0010.00.9990.0
090.0130.0010.9830.003
100.0040.00.9890.007
110.00.0010.9990.0
120.7320.1380.0080.122
130.1790.00.6820.139
140.00.0010.9980.001
150.0080.0050.9840.003
160.0210.0080.9520.019
170.4650.2820.1510.102
180.320.0930.4870.1
190.1780.210.5170.095
PWM
ACGT
01-0.418-0.1090.583-0.424
02-0.141-0.4420.69-0.702
03-0.359-0.6940.831-0.678
04-0.299-0.9990.942-1.125
05-0.61-0.6480.871-0.61
06-0.371-1.544-0.8670.984
07-4.213-4.9821.377-4.213
08-4.525-4.9821.38-4.982
09-2.839-4.5251.364-3.975
10-3.783-4.9821.37-3.362
11-4.982-4.5251.38-4.982
121.07-0.589-3.253-0.71
13-0.331-4.9820.999-0.582
14-4.982-4.5251.379-4.525
15-3.253-3.6221.365-3.975
16-2.405-3.2531.332-2.497
170.6170.12-0.5-0.887
180.245-0.9770.663-0.906
19-0.337-0.1730.723-0.956
Standard thresholds
P-value Threshold
0.001 -0.81229
0.0005 0.79496
0.0001 4.23581