MotifZN141.H12INVIVO.0.P.C
Gene (human)ZNF141
(GeneCards)
Gene synonyms (human)D4S90
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length17
ConsensusdRGGGGMCGCYCYYvYY
GC content75.89%
Information content (bits; total / per base)17.358 / 1.021
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.976 0.981 0.945 0.959 0.975 0.979 5.852 5.885 826.491 895.215
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.110
HGNCHGNC:12926
MGI
EntrezGene (human)GeneID:7700
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN141_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q15928
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01199.080.0443.0278.0
02114.044.0779.063.0
0338.03.0959.00.0
044.04.0716.0276.0
053.01.0890.0106.0
068.062.0920.010.0
07658.0204.0130.08.0
081.0977.02.020.0
09264.02.0727.07.0
105.0970.011.014.0
11134.0567.07.0292.0
1228.0902.03.067.0
1325.0737.055.0183.0
1456.0732.072.0140.0
15430.0359.0111.0100.0
1696.0682.0109.0113.0
1798.0605.037.0260.0
PFM
ACGT
010.1990.080.4430.278
020.1140.0440.7790.063
030.0380.0030.9590.0
040.0040.0040.7160.276
050.0030.0010.890.106
060.0080.0620.920.01
070.6580.2040.130.008
080.0010.9770.0020.02
090.2640.0020.7270.007
100.0050.970.0110.014
110.1340.5670.0070.292
120.0280.9020.0030.067
130.0250.7370.0550.183
140.0560.7320.0720.14
150.430.3590.1110.1
160.0960.6820.1090.113
170.0980.6050.0370.26
PWM
ACGT
01-0.226-1.1250.5690.105
02-0.777-1.7061.132-1.358
03-1.846-3.9751.339-4.982
04-3.783-3.7831.0480.098
05-3.975-4.5251.265-0.849
06-3.253-1.3741.298-3.066
070.963-0.202-0.648-3.253
08-4.5251.358-4.213-2.45
090.054-4.2131.063-3.362
10-3.6221.351-2.985-2.773
11-0.6180.815-3.3620.154
12-2.1361.278-3.975-1.298
13-2.2431.077-1.49-0.309
14-1.4731.07-1.228-0.574
150.5390.36-0.803-0.906
16-0.9460.999-0.821-0.786
17-0.9260.88-1.8720.039
Standard thresholds
P-value Threshold
0.001 1.82381
0.0005 3.13081
0.0001 5.86381