MotifZN134.H12INVITRO.1.P.D
Gene (human)ZNF134
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
D
Motif length22
ConsensusKhvdbvhYYMAKCAGKKGMdGS
GC content52.61%
Information content (bits; total / per base)15.705 / 0.714
Data sourcesChIP-Seq
Aligned words500

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.903 0.929 0.869 0.901 0.887 0.912 7.487 8.107 457.377 512.481
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyZNF134-like {2.3.4.24} (TFClass)
TFClass IDTFClass: 2.3.4.24.1
HGNCHGNC:12918
MGI
EntrezGene (human)GeneID:7693
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN134_HUMAN
UniProt ID (mouse)
UniProt AC (human)P52741
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0148.062.0321.069.0
0282.0281.062.075.0
03111.0263.078.048.0
0479.056.075.0290.0
0572.0179.0160.089.0
06198.2589.25148.2564.25
07119.25194.2549.25137.25
0875.25301.2541.2582.25
0924.25144.2523.25308.25
10260.25172.2534.2533.25
11466.255.2522.256.25
126.2514.25111.25368.25
134.25465.2515.2515.25
14471.256.2517.255.25
155.253.25451.2540.25
1624.2542.25214.25219.25
1728.2538.2594.25339.25
1866.255.25410.2518.25
19363.25101.2528.257.25
20257.2553.2569.25120.25
2118.2540.25425.2516.25
2256.2566.25353.2524.25
PFM
ACGT
010.0960.1240.6420.138
020.1640.5620.1240.15
030.2220.5260.1560.096
040.1580.1120.150.58
050.1440.3580.320.178
060.3970.1790.2970.129
070.2390.3890.0990.275
080.1510.6020.0830.165
090.0490.2890.0470.616
100.5210.3450.0690.067
110.9330.0110.0450.013
120.0130.0290.2230.737
130.0090.9310.0310.031
140.9430.0130.0350.011
150.0110.0070.9030.081
160.0490.0850.4290.439
170.0570.0770.1890.679
180.1330.0110.8210.037
190.7270.2030.0570.015
200.5150.1070.1390.241
210.0370.0810.8510.033
220.1130.1330.7070.049
PWM
ACGT
01-0.938-0.6890.936-0.584
02-0.4150.803-0.689-0.503
03-0.1170.737-0.464-0.938
04-0.452-0.788-0.5030.835
05-0.5430.3550.244-0.335
060.457-0.3320.169-0.654
07-0.0460.436-0.9130.092
08-0.4990.872-1.084-0.412
09-1.590.142-1.630.895
100.7270.317-1.263-1.291
111.307-2.923-1.671-2.786
12-2.786-2.08-0.1151.072
13-3.0821.305-2.019-2.019
141.318-2.786-1.907-2.923
15-2.923-3.2711.275-1.108
16-1.59-1.0610.5340.557
17-1.446-1.157-0.2780.991
18-0.624-2.9231.18-1.855
191.059-0.208-1.446-2.665
200.715-0.837-0.581-0.038
21-1.855-1.1081.216-1.961
22-0.784-0.6241.031-1.59
Standard thresholds
P-value Threshold
0.001 3.17741
0.0005 4.24341
0.0001 6.50051