MotifZN100.H12INVIVO.0.P.B
Gene (human)ZNF100
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length23
ConsensusGCAYKTCTTACATGGYGGYGGCM
GC content56.15%
Information content (bits; total / per base)32.869 / 1.429
Data sourcesChIP-Seq
Aligned words544

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 3 (12) 0.942 0.991 0.923 0.986 0.919 0.986 13.026 19.324 485.72 612.959
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF100-like {2.3.3.59} (TFClass)
TFClass IDTFClass: 2.3.3.59.1
HGNCHGNC:12880
MGI
EntrezGene (human)GeneID:163227
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN100_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8IYN0
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 3 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0113.013.0506.012.0
0210.0503.016.015.0
03526.07.08.03.0
0413.0421.021.089.0
0514.016.0111.0403.0
0610.010.024.0500.0
076.0484.03.051.0
0810.028.010.0496.0
097.014.011.0512.0
10490.050.03.01.0
115.0513.07.019.0
12536.01.06.01.0
1320.017.09.0498.0
143.00.0541.00.0
150.00.0544.00.0
1617.0242.06.0279.0
1783.00.0456.05.0
184.01.0538.01.0
1913.0292.03.0236.0
2094.01.0448.01.0
210.04.0534.06.0
2223.0455.048.018.0
23408.078.023.035.0
PFM
ACGT
010.0240.0240.930.022
020.0180.9250.0290.028
030.9670.0130.0150.006
040.0240.7740.0390.164
050.0260.0290.2040.741
060.0180.0180.0440.919
070.0110.890.0060.094
080.0180.0510.0180.912
090.0130.0260.020.941
100.9010.0920.0060.002
110.0090.9430.0130.035
120.9850.0020.0110.002
130.0370.0310.0170.915
140.0060.00.9940.0
150.00.01.00.0
160.0310.4450.0110.513
170.1530.00.8380.009
180.0070.0020.9890.002
190.0240.5370.0060.434
200.1730.0020.8240.002
210.00.0070.9820.011
220.0420.8360.0880.033
230.750.1430.0420.064
PWM
ACGT
01-2.245-2.2451.305-2.316
02-2.4751.3-2.058-2.116
031.344-2.775-2.665-3.404
04-2.2451.122-1.807-0.418
05-2.179-2.058-0.2011.079
06-2.475-2.475-1.6831.294
07-2.8991.261-3.404-0.962
08-2.475-1.537-2.4751.286
09-2.775-2.179-2.3921.317
101.273-0.981-3.404-3.978
11-3.0411.319-2.775-1.9
121.363-3.978-2.899-3.978
13-1.853-2.002-2.5661.29
14-3.404-4.471.372-4.47
15-4.47-4.471.378-4.47
16-2.0020.571-2.8990.713
17-0.487-4.471.202-3.041
18-3.206-3.9781.367-3.978
19-2.2450.758-3.4040.546
20-0.364-3.9781.184-3.978
21-4.47-3.2061.359-2.899
22-1.7221.2-1.021-1.95
231.091-0.547-1.722-1.325
Standard thresholds
P-value Threshold
0.001 -7.75269
0.0005 -5.87939
0.0001 -1.85789