MotifZKSC8.H12INVITRO.1.P.D
Gene (human)ZKSCAN8
(GeneCards)
Gene synonyms (human)ZNF192
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
D
Motif length15
ConsensusbdSYWdCTGYdTRCh
GC content51.98%
Information content (bits; total / per base)11.258 / 0.751
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (14) 0.723 0.791 0.65 0.755 0.74 0.818 3.602 5.279 80.153 161.509
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.81
HGNCHGNC:12983
MGI
EntrezGene (human)GeneID:7745
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZKSC8_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q15776
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01106.0582.0117.0195.0
02467.082.0321.0130.0
0350.0753.0116.081.0
0448.0747.045.0160.0
05205.092.048.0655.0
06381.0151.0306.0162.0
0738.0829.069.064.0
0838.017.015.0930.0
0936.074.0876.014.0
1054.0129.060.0757.0
11301.085.0292.0322.0
1221.039.043.0897.0
13355.069.0508.068.0
1435.0871.018.076.0
15337.0395.048.0220.0
PFM
ACGT
010.1060.5820.1170.195
020.4670.0820.3210.13
030.050.7530.1160.081
040.0480.7470.0450.16
050.2050.0920.0480.655
060.3810.1510.3060.162
070.0380.8290.0690.064
080.0380.0170.0150.93
090.0360.0740.8760.014
100.0540.1290.060.757
110.3010.0850.2920.322
120.0210.0390.0430.897
130.3550.0690.5080.068
140.0350.8710.0180.076
150.3370.3950.0480.22
PWM
ACGT
01-0.8490.841-0.752-0.247
020.622-1.1010.248-0.648
03-1.5821.098-0.76-1.113
04-1.6221.09-1.684-0.442
05-0.197-0.988-1.6220.959
060.419-0.50.201-0.43
07-1.8461.194-1.27-1.343
08-1.846-2.598-2.7111.309
09-1.898-1.2011.249-2.773
10-1.508-0.655-1.4061.103
110.184-1.0660.1540.252
12-2.405-1.821-1.7281.273
130.349-1.270.706-1.284
14-1.9251.243-2.546-1.175
150.2970.455-1.622-0.127
Standard thresholds
P-value Threshold
0.001 4.41521
0.0005 5.28076
0.0001 7.09876