MotifZIK1.H12INVITRO.0.P.D
Gene (human)ZIK1
(GeneCards)
Gene synonyms (human)ZNF762
Gene (mouse)Zik1
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length23
ConsensusvhRdRRdRRCAAWRKCAMhdvvW
GC content41.17%
Information content (bits; total / per base)15.815 / 0.688
Data sourcesChIP-Seq
Aligned words613

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.909 0.927 0.884 0.897 0.935 0.954 6.337 6.504 141.922 165.959
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF32-like {2.3.3.41} (TFClass)
TFClass IDTFClass: 2.3.3.41.2
HGNCHGNC:33104
MGIMGI:108070
EntrezGene (human)GeneID:284307
(SSTAR profile)
EntrezGene (mouse)GeneID:22775
(SSTAR profile)
UniProt ID (human)ZIK1_HUMAN
UniProt ID (mouse)ZIK1_MOUSE
UniProt AC (human)Q3SY52
(TFClass)
UniProt AC (mouse)Q80YP6
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01290.0103.0123.097.0
02184.0231.077.0121.0
03379.067.084.083.0
04263.067.0118.0165.0
05408.057.097.051.0
06479.035.078.021.0
07207.030.0118.0258.0
08159.02.0378.074.0
09126.027.0454.06.0
1035.0564.09.05.0
11601.04.03.05.0
12562.013.023.015.0
13380.068.020.0145.0
14322.04.0278.09.0
1557.07.0475.074.0
1619.0551.03.040.0
17493.063.09.048.0
18282.0265.046.020.0
19282.0111.079.0141.0
20319.026.0172.096.0
21158.0236.0145.074.0
22166.089.0283.075.0
23397.046.066.0104.0
PFM
ACGT
010.4730.1680.2010.158
020.30.3770.1260.197
030.6180.1090.1370.135
040.4290.1090.1920.269
050.6660.0930.1580.083
060.7810.0570.1270.034
070.3380.0490.1920.421
080.2590.0030.6170.121
090.2060.0440.7410.01
100.0570.920.0150.008
110.980.0070.0050.008
120.9170.0210.0380.024
130.620.1110.0330.237
140.5250.0070.4540.015
150.0930.0110.7750.121
160.0310.8990.0050.065
170.8040.1030.0150.078
180.460.4320.0750.033
190.460.1810.1290.23
200.520.0420.2810.157
210.2580.3850.2370.121
220.2710.1450.4620.122
230.6480.0750.1080.17
PWM
ACGT
010.633-0.392-0.217-0.451
020.1810.407-0.678-0.234
030.899-0.814-0.593-0.604
040.536-0.814-0.2580.073
050.973-0.972-0.451-1.08
061.133-1.442-0.665-1.924
070.298-1.589-0.2580.517
080.036-3.760.897-0.717
09-0.194-1.6891.079-3.014
10-1.4421.295-2.681-3.155
111.359-3.319-3.515-3.155
121.292-2.361-1.84-2.233
130.902-0.8-1.97-0.055
140.737-3.3190.591-2.681
15-0.972-2.891.124-0.717
16-2.0171.272-3.515-1.314
171.161-0.874-2.681-1.138
180.6050.543-1.18-1.97
190.605-0.319-0.653-0.082
200.728-1.7250.114-0.462
210.030.428-0.055-0.717
220.079-0.5360.609-0.704
230.945-1.18-0.829-0.383
Standard thresholds
P-value Threshold
0.001 3.03566
0.0005 4.13951
0.0001 6.46296