MotifZFX.H12CORE.0.P.B
Gene (human)ZFX
(GeneCards)
Gene synonyms (human)
Gene (mouse)Zfx
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length10
ConsensusSYAGGCCbvR
GC content72.5%
Information content (bits; total / per base)11.676 / 1.168
Data sourcesChIP-Seq
Aligned words999

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 20 (123) 0.836 0.873 0.675 0.75 0.751 0.785 1.963 2.122 40.201 156.959
Mouse 1 (7) 0.878 0.902 0.741 0.795 0.759 0.774 1.992 2.073 130.721 145.721

rSNP benchmarking, ADASTRA odds-ratio -log-Fisher's P Pearson r Kendall tau
# 3.948 13.162 0.102 0.055
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZFX-ZFY {2.3.3.65} (TFClass)
TFClass IDTFClass: 2.3.3.65.1
HGNCHGNC:12869
MGIMGI:99211
EntrezGene (human)GeneID:7543
(SSTAR profile)
EntrezGene (mouse)GeneID:22764
(SSTAR profile)
UniProt ID (human)ZFX_HUMAN
UniProt ID (mouse)ZFX_MOUSE
UniProt AC (human)P17010
(TFClass)
UniProt AC (mouse)P17012
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 20 human, 1 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0199.0537.0320.043.0
02113.0514.034.0338.0
03994.02.03.00.0
043.00.0996.00.0
050.01.0998.00.0
062.0989.06.02.0
073.0989.00.07.0
0857.0281.0305.0356.0
09214.0534.0175.076.0
10375.046.0513.065.0
PFM
ACGT
010.0990.5380.320.043
020.1130.5150.0340.338
030.9950.0020.0030.0
040.0030.00.9970.0
050.00.0010.9990.0
060.0020.990.0060.002
070.0030.990.00.007
080.0570.2810.3050.356
090.2140.5350.1750.076
100.3750.0460.5140.065
PWM
ACGT
01-0.9150.7620.246-1.727
02-0.7850.718-1.9510.301
031.376-4.212-3.974-4.981
04-3.974-4.9811.378-4.981
05-4.981-4.5241.38-4.981
06-4.2121.371-3.483-4.212
07-3.9741.371-4.981-3.361
08-1.4540.1170.1990.352
09-0.1530.756-0.353-1.174
100.404-1.6620.716-1.327
Standard thresholds
P-value Threshold
0.001 3.625235
0.0005 5.126705
0.0001 7.754825