| Motif | ZFP90.H12INVIVO.0.P.C |
| Gene (human) | ZFP90 (GeneCards) |
| Gene synonyms (human) | KIAA1954, ZNF756 |
| Gene (mouse) | Zfp90 |
| Gene synonyms (mouse) | Nk10 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | C |
| Motif | ZFP90.H12INVIVO.0.P.C |
| Gene (human) | ZFP90 (GeneCards) |
| Gene synonyms (human) | KIAA1954, ZNF756 |
| Gene (mouse) | Zfp90 |
| Gene synonyms (mouse) | Nk10 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | C |
| Motif length | 13 |
| Consensus | RCWGCYTTdSCTG |
| GC content | 49.29% |
| Information content (bits; total / per base) | 14.668 / 1.128 |
| Data sources | ChIP-Seq |
| Aligned words | 316 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (4) | 0.9 | 0.909 | 0.892 | 0.898 | 0.87 | 0.876 | 6.434 | 6.663 | 185.003 | 255.854 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.149 |
| HGNC | HGNC:23329 |
| MGI | MGI:104786 |
| EntrezGene (human) | GeneID:146198 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:22751 (SSTAR profile) |
| UniProt ID (human) | ZFP90_HUMAN |
| UniProt ID (mouse) | ZFP90_MOUSE |
| UniProt AC (human) | Q8TF47 (TFClass) |
| UniProt AC (mouse) | Q61967 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZFP90.H12INVIVO.0.P.C.pcm |
| PWM | ZFP90.H12INVIVO.0.P.C.pwm |
| PFM | ZFP90.H12INVIVO.0.P.C.pfm |
| Alignment | ZFP90.H12INVIVO.0.P.C.words.tsv |
| Threshold to P-value map | ZFP90.H12INVIVO.0.P.C.thr |
| Motif in other formats | |
| JASPAR format | ZFP90.H12INVIVO.0.P.C_jaspar_format.txt |
| MEME format | ZFP90.H12INVIVO.0.P.C_meme_format.meme |
| Transfac format | ZFP90.H12INVIVO.0.P.C_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 229.0 | 11.0 | 66.0 | 10.0 |
| 02 | 9.0 | 267.0 | 10.0 | 30.0 |
| 03 | 40.0 | 16.0 | 16.0 | 244.0 |
| 04 | 26.0 | 19.0 | 266.0 | 5.0 |
| 05 | 3.0 | 294.0 | 6.0 | 13.0 |
| 06 | 21.0 | 63.0 | 6.0 | 226.0 |
| 07 | 9.0 | 10.0 | 5.0 | 292.0 |
| 08 | 8.0 | 6.0 | 12.0 | 290.0 |
| 09 | 150.0 | 11.0 | 95.0 | 60.0 |
| 10 | 28.0 | 31.0 | 246.0 | 11.0 |
| 11 | 19.0 | 271.0 | 13.0 | 13.0 |
| 12 | 7.0 | 9.0 | 1.0 | 299.0 |
| 13 | 22.0 | 6.0 | 269.0 | 19.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.725 | 0.035 | 0.209 | 0.032 |
| 02 | 0.028 | 0.845 | 0.032 | 0.095 |
| 03 | 0.127 | 0.051 | 0.051 | 0.772 |
| 04 | 0.082 | 0.06 | 0.842 | 0.016 |
| 05 | 0.009 | 0.93 | 0.019 | 0.041 |
| 06 | 0.066 | 0.199 | 0.019 | 0.715 |
| 07 | 0.028 | 0.032 | 0.016 | 0.924 |
| 08 | 0.025 | 0.019 | 0.038 | 0.918 |
| 09 | 0.475 | 0.035 | 0.301 | 0.19 |
| 10 | 0.089 | 0.098 | 0.778 | 0.035 |
| 11 | 0.06 | 0.858 | 0.041 | 0.041 |
| 12 | 0.022 | 0.028 | 0.003 | 0.946 |
| 13 | 0.07 | 0.019 | 0.851 | 0.06 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.052 | -1.867 | -0.176 | -1.95 |
| 02 | -2.042 | 1.205 | -1.95 | -0.939 |
| 03 | -0.663 | -1.529 | -1.529 | 1.116 |
| 04 | -1.076 | -1.37 | 1.201 | -2.525 |
| 05 | -2.897 | 1.301 | -2.381 | -1.718 |
| 06 | -1.277 | -0.222 | -2.381 | 1.039 |
| 07 | -2.042 | -1.95 | -2.525 | 1.294 |
| 08 | -2.143 | -2.381 | -1.789 | 1.287 |
| 09 | 0.633 | -1.867 | 0.181 | -0.269 |
| 10 | -1.005 | -0.908 | 1.124 | -1.867 |
| 11 | -1.37 | 1.22 | -1.718 | -1.718 |
| 12 | -2.255 | -2.042 | -3.496 | 1.318 |
| 13 | -1.233 | -2.381 | 1.213 | -1.37 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.52346 |
| 0.0005 | 4.548415 |
| 0.0001 | 6.70282 |