MotifZFP90.H12INVITRO.1.P.D
Gene (human)ZFP90
(GeneCards)
Gene synonyms (human)KIAA1954, ZNF756
Gene (mouse)Zfp90
Gene synonyms (mouse)Nk10
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
D
Motif length23
ConsensusYCCTCTdARYACTGCYTTWGCTG
GC content49.31%
Information content (bits; total / per base)27.538 / 1.197
Data sourcesChIP-Seq
Aligned words779

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.894 0.896 0.899 0.899 0.885 0.888 12.863 13.46 218.431 302.119
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.149
HGNCHGNC:23329
MGIMGI:104786
EntrezGene (human)GeneID:146198
(SSTAR profile)
EntrezGene (mouse)GeneID:22751
(SSTAR profile)
UniProt ID (human)ZFP90_HUMAN
UniProt ID (mouse)ZFP90_MOUSE
UniProt AC (human)Q8TF47
(TFClass)
UniProt AC (mouse)Q61967
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0127.0417.065.0270.0
0213.0734.07.025.0
036.0741.01.031.0
0418.051.04.0706.0
0511.0684.026.058.0
0650.052.011.0666.0
07299.053.0113.0314.0
08648.033.060.038.0
09344.043.0360.032.0
1035.0491.034.0219.0
11642.025.090.022.0
128.0703.010.058.0
1374.037.022.0646.0
1438.014.0716.011.0
1511.0749.06.013.0
1642.0132.09.0596.0
1713.013.010.0743.0
186.013.07.0753.0
19475.019.0138.0147.0
2060.040.0659.020.0
2125.0705.014.035.0
2214.021.07.0737.0
2356.014.0682.027.0
PFM
ACGT
010.0350.5350.0830.347
020.0170.9420.0090.032
030.0080.9510.0010.04
040.0230.0650.0050.906
050.0140.8780.0330.074
060.0640.0670.0140.855
070.3840.0680.1450.403
080.8320.0420.0770.049
090.4420.0550.4620.041
100.0450.630.0440.281
110.8240.0320.1160.028
120.010.9020.0130.074
130.0950.0470.0280.829
140.0490.0180.9190.014
150.0140.9610.0080.017
160.0540.1690.0120.765
170.0170.0170.0130.954
180.0080.0170.0090.967
190.610.0240.1770.189
200.0770.0510.8460.026
210.0320.9050.0180.045
220.0180.0270.0090.946
230.0720.0180.8750.035
PWM
ACGT
01-1.9250.757-1.0810.324
02-2.5951.321-3.121-1.997
03-3.2441.33-4.3-1.794
04-2.301-1.316-3.5461.282
05-2.7411.25-1.96-1.191
06-1.335-1.297-2.7411.224
070.426-1.279-0.5380.474
081.196-1.735-1.159-1.6
090.565-1.4810.61-1.764
10-1.6780.92-1.7060.116
111.187-1.997-0.762-2.116
12-3.0121.277-2.824-1.191
13-0.954-1.625-2.1161.193
14-1.6-2.5291.296-2.741
15-2.7411.341-3.244-2.595
16-1.504-0.385-2.9131.113
17-2.595-2.595-2.8241.333
18-3.244-2.595-3.1211.346
190.887-2.252-0.341-0.279
20-1.159-1.5511.213-2.205
21-1.9971.28-2.529-1.678
22-2.529-2.159-3.1211.325
23-1.226-2.5291.247-1.925
Standard thresholds
P-value Threshold
0.001 -2.77994
0.0005 -1.24289
0.0001 2.05951