MotifZFP82.H12INVITRO.0.P.D
Gene (human)ZFP82
(GeneCards)
Gene synonyms (human)KIAA1948, ZNF545
Gene (mouse)Zfp82
Gene synonyms (mouse)Kiaa1948, Znf545
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length25
ConsensushTTChAdYYbMYdRWdWYTYYMTTY
GC content37.81%
Information content (bits; total / per base)18.132 / 0.725
Data sourcesChIP-Seq
Aligned words872

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.765 0.807 0.71 0.767 0.852 0.858 7.163 7.713 152.824 172.523
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZFP30-like {2.3.3.63} (TFClass)
TFClass IDTFClass: 2.3.3.63.2
HGNCHGNC:28682
MGIMGI:1890753
EntrezGene (human)GeneID:284406
(SSTAR profile)
EntrezGene (mouse)GeneID:330502
(SSTAR profile)
UniProt ID (human)ZFP82_HUMAN
UniProt ID (mouse)ZFP82_MOUSE
UniProt AC (human)Q8N141
(TFClass)
UniProt AC (mouse)Q6P9Y7
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01214.0423.025.0210.0
0237.085.044.0706.0
038.048.019.0797.0
0411.0683.03.0175.0
05103.0651.015.0103.0
06716.060.030.066.0
07167.055.0332.0318.0
0852.0130.068.0622.0
0925.0193.046.0608.0
1040.0475.0191.0166.0
11645.092.050.085.0
1267.0452.063.0290.0
13105.096.0200.0471.0
14568.084.0168.052.0
15535.080.042.0215.0
16120.058.0199.0495.0
17177.096.026.0573.0
1824.0489.037.0322.0
1919.0148.018.0687.0
2088.0559.025.0200.0
2169.0270.021.0512.0
22156.0536.038.0142.0
2315.094.012.0751.0
2422.0119.037.0694.0
2529.0530.027.0286.0
PFM
ACGT
010.2450.4850.0290.241
020.0420.0970.050.81
030.0090.0550.0220.914
040.0130.7830.0030.201
050.1180.7470.0170.118
060.8210.0690.0340.076
070.1920.0630.3810.365
080.060.1490.0780.713
090.0290.2210.0530.697
100.0460.5450.2190.19
110.740.1060.0570.097
120.0770.5180.0720.333
130.120.110.2290.54
140.6510.0960.1930.06
150.6140.0920.0480.247
160.1380.0670.2280.568
170.2030.110.030.657
180.0280.5610.0420.369
190.0220.170.0210.788
200.1010.6410.0290.229
210.0790.310.0240.587
220.1790.6150.0440.163
230.0170.1080.0140.861
240.0250.1360.0420.796
250.0330.6080.0310.328
PWM
ACGT
01-0.0180.659-2.108-0.037
02-1.737-0.93-1.571.17
03-3.121-1.486-2.3621.291
04-2.8511.137-3.846-0.218
05-0.7411.089-2.577-0.741
061.184-1.27-1.936-1.177
07-0.264-1.3550.4180.375
08-1.409-0.512-1.1481.043
09-2.108-0.121-1.5271.021
10-1.6620.775-0.131-0.27
111.08-0.852-1.447-0.93
12-1.1630.725-1.2230.283
13-0.722-0.81-0.0850.766
140.953-0.941-0.258-1.409
150.893-0.989-1.615-0.014
16-0.591-1.303-0.090.816
17-0.207-0.81-2.0710.962
18-2.1460.804-1.7370.388
19-2.362-0.384-2.4121.143
20-0.8960.937-2.108-0.085
21-1.1340.212-2.270.849
22-0.3320.895-1.711-0.425
23-2.577-0.831-2.7751.231
24-2.227-0.599-1.7371.153
25-1.9680.884-2.0360.27
Standard thresholds
P-value Threshold
0.001 2.35416
0.0005 3.49371
0.0001 5.91891