| Motif | ZFP57.H12RSNP.0.P.D |
| Gene (human) | ZFP57 (GeneCards) |
| Gene synonyms (human) | C6orf40, ZNF698 |
| Gene (mouse) | Zfp57 |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZFP57.H12RSNP.0.P.D |
| Gene (human) | ZFP57 (GeneCards) |
| Gene synonyms (human) | C6orf40, ZNF698 |
| Gene (mouse) | Zfp57 |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 9 |
| Consensus | vbGCGGCAv |
| GC content | 75.33% |
| Information content (bits; total / per base) | 12.297 / 1.366 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (4) | 0.913 | 0.925 | 0.785 | 0.813 | 0.934 | 0.936 | 3.332 | 3.369 | 320.984 | 331.367 |
| Mouse | 4 (25) | 0.948 | 0.976 | 0.875 | 0.937 | 0.931 | 0.954 | 3.519 | 4.339 | 44.301 | 302.553 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Multiple dispersed zinc fingers {2.3.4} (TFClass) |
| TF subfamily | Unclassified {2.3.4.0} (TFClass) |
| TFClass ID | TFClass: 2.3.4.0.28 |
| HGNC | HGNC:18791 |
| MGI | MGI:99204 |
| EntrezGene (human) | GeneID:346171 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:22715 (SSTAR profile) |
| UniProt ID (human) | ZFP57_HUMAN |
| UniProt ID (mouse) | ZFP57_MOUSE |
| UniProt AC (human) | Q9NU63 (TFClass) |
| UniProt AC (mouse) | Q8C6P8 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 4 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZFP57.H12RSNP.0.P.D.pcm |
| PWM | ZFP57.H12RSNP.0.P.D.pwm |
| PFM | ZFP57.H12RSNP.0.P.D.pfm |
| Alignment | ZFP57.H12RSNP.0.P.D.words.tsv |
| Threshold to P-value map | ZFP57.H12RSNP.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZFP57.H12RSNP.0.P.D_jaspar_format.txt |
| MEME format | ZFP57.H12RSNP.0.P.D_meme_format.meme |
| Transfac format | ZFP57.H12RSNP.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 150.0 | 484.0 | 253.0 | 113.0 |
| 02 | 94.0 | 376.0 | 120.0 | 410.0 |
| 03 | 14.0 | 8.0 | 977.0 | 1.0 |
| 04 | 1.0 | 998.0 | 1.0 | 0.0 |
| 05 | 2.0 | 0.0 | 998.0 | 0.0 |
| 06 | 0.0 | 1.0 | 999.0 | 0.0 |
| 07 | 1.0 | 998.0 | 0.0 | 1.0 |
| 08 | 982.0 | 18.0 | 0.0 | 0.0 |
| 09 | 392.0 | 302.0 | 247.0 | 59.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.15 | 0.484 | 0.253 | 0.113 |
| 02 | 0.094 | 0.376 | 0.12 | 0.41 |
| 03 | 0.014 | 0.008 | 0.977 | 0.001 |
| 04 | 0.001 | 0.998 | 0.001 | 0.0 |
| 05 | 0.002 | 0.0 | 0.998 | 0.0 |
| 06 | 0.0 | 0.001 | 0.999 | 0.0 |
| 07 | 0.001 | 0.998 | 0.0 | 0.001 |
| 08 | 0.982 | 0.018 | 0.0 | 0.0 |
| 09 | 0.392 | 0.302 | 0.247 | 0.059 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.506 | 0.657 | 0.012 | -0.786 |
| 02 | -0.967 | 0.406 | -0.727 | 0.492 |
| 03 | -2.773 | -3.253 | 1.358 | -4.525 |
| 04 | -4.525 | 1.379 | -4.525 | -4.982 |
| 05 | -4.213 | -4.982 | 1.379 | -4.982 |
| 06 | -4.982 | -4.525 | 1.38 | -4.982 |
| 07 | -4.525 | 1.379 | -4.982 | -4.525 |
| 08 | 1.363 | -2.546 | -4.982 | -4.982 |
| 09 | 0.447 | 0.188 | -0.012 | -1.422 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.14441 |
| 0.0005 | 4.01871 |
| 0.0001 | 8.01658 |