| Motif | ZEB1.H12INVITRO.0.P.D |
| Gene (human) | ZEB1 (GeneCards) |
| Gene synonyms (human) | AREB6, TCF8 |
| Gene (mouse) | Zeb1 |
| Gene synonyms (mouse) | Tcf8, Zfhx1a, Zfx1a, Zfx1ha |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZEB1.H12INVITRO.0.P.D |
| Gene (human) | ZEB1 (GeneCards) |
| Gene synonyms (human) | AREB6, TCF8 |
| Gene (mouse) | Zeb1 |
| Gene synonyms (mouse) | Tcf8, Zfhx1a, Zfx1a, Zfx1ha |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 11 |
| Consensus | vbvCAGGTGhR |
| GC content | 64.3% |
| Information content (bits; total / per base) | 12.463 / 1.133 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 13 (76) | 0.791 | 0.913 | 0.614 | 0.749 | 0.819 | 0.94 | 2.73 | 3.887 | 51.659 | 189.921 |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Homeo domain factors {3.1} (TFClass) |
| TF family | HD-ZF {3.1.8} (TFClass) |
| TF subfamily | ZEB {3.1.8.3} (TFClass) |
| TFClass ID | TFClass: 3.1.8.3.1 |
| HGNC | HGNC:11642 |
| MGI | MGI:1344313 |
| EntrezGene (human) | GeneID:6935 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:21417 (SSTAR profile) |
| UniProt ID (human) | ZEB1_HUMAN |
| UniProt ID (mouse) | ZEB1_MOUSE |
| UniProt AC (human) | P37275 (TFClass) |
| UniProt AC (mouse) | Q64318 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 13 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZEB1.H12INVITRO.0.P.D.pcm |
| PWM | ZEB1.H12INVITRO.0.P.D.pwm |
| PFM | ZEB1.H12INVITRO.0.P.D.pfm |
| Alignment | ZEB1.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | ZEB1.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZEB1.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | ZEB1.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | ZEB1.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 126.0 | 265.0 | 491.0 | 118.0 |
| 02 | 59.0 | 353.0 | 400.0 | 188.0 |
| 03 | 253.0 | 358.0 | 319.0 | 70.0 |
| 04 | 22.0 | 966.0 | 10.0 | 2.0 |
| 05 | 999.0 | 0.0 | 0.0 | 1.0 |
| 06 | 0.0 | 2.0 | 998.0 | 0.0 |
| 07 | 0.0 | 2.0 | 997.0 | 1.0 |
| 08 | 2.0 | 1.0 | 0.0 | 997.0 |
| 09 | 192.0 | 1.0 | 805.0 | 2.0 |
| 10 | 480.0 | 173.0 | 124.0 | 223.0 |
| 11 | 155.0 | 114.0 | 694.0 | 37.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.126 | 0.265 | 0.491 | 0.118 |
| 02 | 0.059 | 0.353 | 0.4 | 0.188 |
| 03 | 0.253 | 0.358 | 0.319 | 0.07 |
| 04 | 0.022 | 0.966 | 0.01 | 0.002 |
| 05 | 0.999 | 0.0 | 0.0 | 0.001 |
| 06 | 0.0 | 0.002 | 0.998 | 0.0 |
| 07 | 0.0 | 0.002 | 0.997 | 0.001 |
| 08 | 0.002 | 0.001 | 0.0 | 0.997 |
| 09 | 0.192 | 0.001 | 0.805 | 0.002 |
| 10 | 0.48 | 0.173 | 0.124 | 0.223 |
| 11 | 0.155 | 0.114 | 0.694 | 0.037 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.678 | 0.058 | 0.672 | -0.743 |
| 02 | -1.422 | 0.343 | 0.467 | -0.283 |
| 03 | 0.012 | 0.357 | 0.242 | -1.255 |
| 04 | -2.362 | 1.347 | -3.066 | -4.213 |
| 05 | 1.38 | -4.982 | -4.982 | -4.525 |
| 06 | -4.982 | -4.213 | 1.379 | -4.982 |
| 07 | -4.982 | -4.213 | 1.378 | -4.525 |
| 08 | -4.213 | -4.525 | -4.982 | 1.378 |
| 09 | -0.262 | -4.525 | 1.165 | -4.213 |
| 10 | 0.649 | -0.365 | -0.694 | -0.113 |
| 11 | -0.474 | -0.777 | 1.017 | -1.872 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.288475 |
| 0.0005 | 4.597735 |
| 0.0001 | 7.58444 |