MotifZBT49.H12INVIVO.0.P.C
Gene (human)ZBTB49
(GeneCards)
Gene synonyms (human)ZNF509
Gene (mouse)Zbtb49
Gene synonyms (mouse)Zfp509, Znf509
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusGWGACCdKMCMKGMvRAARKRRb
GC content54.85%
Information content (bits; total / per base)19.988 / 0.869
Data sourcesChIP-Seq
Aligned words73

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (2) 0.809 0.809 0.754 0.754 0.848 0.848 7.555 7.555 30.432 30.432
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.38
HGNCHGNC:19883
MGIMGI:1922329
EntrezGene (human)GeneID:166793
(SSTAR profile)
EntrezGene (mouse)GeneID:75079
(SSTAR profile)
UniProt ID (human)ZBT49_HUMAN
UniProt ID (mouse)ZBT49_MOUSE
UniProt AC (human)Q6ZSB9
(TFClass)
UniProt AC (mouse)Q8BXX2
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
018.03.058.04.0
0219.04.02.048.0
033.01.067.02.0
0459.09.02.03.0
051.072.00.00.0
0610.057.04.02.0
0741.06.010.016.0
083.05.049.016.0
099.054.08.02.0
107.060.04.02.0
1154.09.02.08.0
1213.03.040.017.0
137.01.062.03.0
1415.051.06.01.0
1525.028.015.05.0
1649.07.015.02.0
1767.01.02.03.0
1855.015.01.02.0
1952.04.015.02.0
2010.01.012.050.0
219.06.056.02.0
2225.02.046.00.0
238.020.026.019.0
PFM
ACGT
010.110.0410.7950.055
020.260.0550.0270.658
030.0410.0140.9180.027
040.8080.1230.0270.041
050.0140.9860.00.0
060.1370.7810.0550.027
070.5620.0820.1370.219
080.0410.0680.6710.219
090.1230.740.110.027
100.0960.8220.0550.027
110.740.1230.0270.11
120.1780.0410.5480.233
130.0960.0140.8490.041
140.2050.6990.0820.014
150.3420.3840.2050.068
160.6710.0960.2050.027
170.9180.0140.0270.041
180.7530.2050.0140.027
190.7120.0550.2050.027
200.1370.0140.1640.685
210.1230.0820.7670.027
220.3420.0270.630.0
230.110.2740.3560.26
PWM
ACGT
01-0.756-1.5571.117-1.337
020.038-1.337-1.8390.932
03-1.557-2.2321.259-1.839
041.134-0.651-1.839-1.557
05-2.2321.33-2.891-2.891
06-0.5571.1-1.337-1.839
070.778-1.005-0.557-0.124
08-1.557-1.1570.952-0.124
09-0.6511.047-0.756-1.839
10-0.8731.151-1.337-1.839
111.047-0.651-1.839-0.756
12-0.317-1.5570.754-0.067
13-0.873-2.2321.183-1.557
14-0.1840.991-1.005-2.232
150.30.409-0.184-1.157
160.952-0.873-0.184-1.839
171.259-2.232-1.839-1.557
181.065-0.184-2.232-1.839
191.01-1.337-0.184-1.839
20-0.557-2.232-0.3910.972
21-0.651-1.0051.083-1.839
220.3-1.8390.89-2.891
23-0.7560.0870.3370.038
Standard thresholds
P-value Threshold
0.001 2.52081
0.0005 3.63101
0.0001 6.00271