| Motif | ZBT42.H12INVITRO.0.P.D |
| Gene (human) | ZBTB42 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Zbtb42 |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZBT42.H12INVITRO.0.P.D |
| Gene (human) | ZBTB42 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Zbtb42 |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 11 |
| Consensus | bSCAGMTGYKb |
| GC content | 60.29% |
| Information content (bits; total / per base) | 11.986 / 1.09 |
| Data sources | ChIP-Seq |
| Aligned words | 1001 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (5) | 0.898 | 0.93 | 0.825 | 0.865 | 0.861 | 0.89 | 2.977 | 3.068 | 319.102 | 376.252 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF238-like {2.3.3.16} (TFClass) |
| TFClass ID | TFClass: 2.3.3.16.2 |
| HGNC | HGNC:32550 |
| MGI | MGI:3644133 |
| EntrezGene (human) | GeneID:100128927 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:382639 (SSTAR profile) |
| UniProt ID (human) | ZBT42_HUMAN |
| UniProt ID (mouse) | ZBT42_MOUSE |
| UniProt AC (human) | B2RXF5 (TFClass) |
| UniProt AC (mouse) | Q811H0 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZBT42.H12INVITRO.0.P.D.pcm |
| PWM | ZBT42.H12INVITRO.0.P.D.pwm |
| PFM | ZBT42.H12INVITRO.0.P.D.pfm |
| Alignment | ZBT42.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | ZBT42.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZBT42.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | ZBT42.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | ZBT42.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 82.0 | 169.0 | 320.0 | 430.0 |
| 02 | 119.0 | 581.0 | 297.0 | 4.0 |
| 03 | 3.0 | 997.0 | 0.0 | 1.0 |
| 04 | 933.0 | 1.0 | 1.0 | 66.0 |
| 05 | 1.0 | 4.0 | 991.0 | 5.0 |
| 06 | 453.0 | 509.0 | 18.0 | 21.0 |
| 07 | 7.0 | 0.0 | 97.0 | 897.0 |
| 08 | 2.0 | 1.0 | 997.0 | 1.0 |
| 09 | 20.0 | 330.0 | 18.0 | 633.0 |
| 10 | 74.0 | 73.0 | 511.0 | 343.0 |
| 11 | 119.0 | 275.0 | 449.0 | 158.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.082 | 0.169 | 0.32 | 0.43 |
| 02 | 0.119 | 0.58 | 0.297 | 0.004 |
| 03 | 0.003 | 0.996 | 0.0 | 0.001 |
| 04 | 0.932 | 0.001 | 0.001 | 0.066 |
| 05 | 0.001 | 0.004 | 0.99 | 0.005 |
| 06 | 0.453 | 0.508 | 0.018 | 0.021 |
| 07 | 0.007 | 0.0 | 0.097 | 0.896 |
| 08 | 0.002 | 0.001 | 0.996 | 0.001 |
| 09 | 0.02 | 0.33 | 0.018 | 0.632 |
| 10 | 0.074 | 0.073 | 0.51 | 0.343 |
| 11 | 0.119 | 0.275 | 0.449 | 0.158 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.102 | -0.389 | 0.244 | 0.538 |
| 02 | -0.736 | 0.838 | 0.17 | -3.784 |
| 03 | -3.976 | 1.377 | -4.983 | -4.526 |
| 04 | 1.311 | -4.526 | -4.526 | -1.314 |
| 05 | -4.526 | -3.784 | 1.371 | -3.623 |
| 06 | 0.59 | 0.706 | -2.547 | -2.406 |
| 07 | -3.363 | -4.983 | -0.937 | 1.272 |
| 08 | -4.214 | -4.526 | 1.377 | -4.526 |
| 09 | -2.451 | 0.275 | -2.547 | 0.924 |
| 10 | -1.202 | -1.215 | 0.71 | 0.313 |
| 11 | -0.736 | 0.094 | 0.582 | -0.456 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.860725 |
| 0.0005 | 5.046375 |
| 0.0001 | 7.501445 |