MotifZBT40.H12INVIVO.0.P.B
Gene (human)ZBTB40
(GeneCards)
Gene synonyms (human)KIAA0478
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length23
ConsensusWKYYAAWAAAACTTTATTKRhAM
GC content21.52%
Information content (bits; total / per base)26.527 / 1.153
Data sourcesChIP-Seq
Aligned words571

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 6 (40) 0.565 0.938 0.545 0.93 0.568 0.963 5.289 16.336 140.639 726.959
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.123
HGNCHGNC:29045
MGI
EntrezGene (human)GeneID:9923
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZBT40_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9NUA8
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 6 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0145.034.038.0454.0
0253.044.084.0390.0
0355.0346.034.0136.0
0478.0378.022.093.0
05472.028.043.028.0
06480.032.032.027.0
0782.034.029.0426.0
08516.017.025.013.0
09509.036.014.012.0
10546.06.011.08.0
11499.03.052.017.0
125.0557.02.07.0
132.08.03.0558.0
148.08.05.0550.0
154.025.05.0537.0
16533.024.010.04.0
179.010.09.0543.0
1813.031.023.0504.0
1967.026.094.0384.0
20453.018.067.033.0
2163.0312.039.0157.0
22475.047.026.023.0
23386.073.062.050.0
PFM
ACGT
010.0790.060.0670.795
020.0930.0770.1470.683
030.0960.6060.060.238
040.1370.6620.0390.163
050.8270.0490.0750.049
060.8410.0560.0560.047
070.1440.060.0510.746
080.9040.030.0440.023
090.8910.0630.0250.021
100.9560.0110.0190.014
110.8740.0050.0910.03
120.0090.9750.0040.012
130.0040.0140.0050.977
140.0140.0140.0090.963
150.0070.0440.0090.94
160.9330.0420.0180.007
170.0160.0180.0160.951
180.0230.0540.040.883
190.1170.0460.1650.673
200.7930.0320.1170.058
210.110.5460.0680.275
220.8320.0820.0460.04
230.6760.1280.1090.088
PWM
ACGT
01-1.131-1.4-1.2941.149
02-0.972-1.153-0.5230.998
03-0.9360.879-1.4-0.048
04-0.5950.967-1.811-0.423
051.188-1.585-1.175-1.585
061.205-1.458-1.458-1.619
07-0.546-1.4-1.5521.086
081.277-2.05-1.692-2.292
091.263-1.345-2.226-2.363
101.333-2.946-2.439-2.712
111.244-3.449-0.991-2.05
12-3.0871.353-3.695-2.822
13-3.695-2.712-3.4491.355
14-2.712-2.712-3.0871.341
15-3.252-1.692-3.0871.317
161.309-1.73-2.522-3.252
17-2.613-2.522-2.6131.328
18-2.292-1.488-1.771.254
19-0.744-1.655-0.4120.983
201.147-1.997-0.744-1.429
21-0.8040.776-1.2690.094
221.195-1.089-1.655-1.77
230.988-0.66-0.82-1.029
Standard thresholds
P-value Threshold
0.001 -1.87164
0.0005 -0.39839
0.0001 2.76711