Motif | ZBT37.H12INVIVO.0.M.D |
Gene (human) | ZBTB37 (GeneCards) |
Gene synonyms (human) | |
Gene (mouse) | |
Gene synonyms (mouse) | |
LOGO | |
LOGO (reverse complement) | |
Motif subtype | 0 |
Quality | D |
Motif | ZBT37.H12INVIVO.0.M.D |
Gene (human) | ZBTB37 (GeneCards) |
Gene synonyms (human) | |
Gene (mouse) | |
Gene synonyms (mouse) | |
LOGO | |
LOGO (reverse complement) | |
Motif subtype | 0 |
Quality | D |
Motif length | 11 |
Consensus | nhhTYACCGSv |
GC content | 58.37% |
Information content (bits; total / per base) | 10.861 / 0.987 |
Data sources | Methyl-HT-SELEX |
Aligned words | 9432 |
HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
---|---|---|---|---|---|---|---|
Methyl HT-SELEX, 1 experiments | median | 0.941 | 0.913 | 0.894 | 0.858 | 0.819 | 0.787 |
best | 0.941 | 0.913 | 0.894 | 0.858 | 0.819 | 0.787 |
TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
TF class | C2H2 zinc finger factors {2.3} (TFClass) |
TF family | Other with up to three adjacent zinc fingers {2.3.2} (TFClass) |
TF subfamily | BTB-POZ {2.3.2.1} (TFClass) |
TFClass ID | TFClass: 2.3.2.1.9 |
HGNC | HGNC:28365 |
MGI | |
EntrezGene (human) | GeneID:84614 (SSTAR profile) |
EntrezGene (mouse) | |
UniProt ID (human) | ZBT37_HUMAN |
UniProt ID (mouse) | |
UniProt AC (human) | Q5TC79 (TFClass) |
UniProt AC (mouse) | |
GRECO-DB-TF | yes |
ChIP-Seq | 0 human, 0 mouse |
HT-SELEX | 0 |
Methyl-HT-SELEX | 1 |
PCM | ZBT37.H12INVIVO.0.M.D.pcm |
PWM | ZBT37.H12INVIVO.0.M.D.pwm |
PFM | ZBT37.H12INVIVO.0.M.D.pfm |
Alignment | ZBT37.H12INVIVO.0.M.D.words.tsv |
Threshold to P-value map | ZBT37.H12INVIVO.0.M.D.thr |
Motif in other formats | |
JASPAR format | ZBT37.H12INVIVO.0.M.D_jaspar_format.txt |
MEME format | ZBT37.H12INVIVO.0.M.D_meme_format.meme |
Transfac format | ZBT37.H12INVIVO.0.M.D_transfac_format.txt |
Homer format |
A | C | G | T | |
---|---|---|---|---|
01 | 2590.75 | 2985.75 | 2217.75 | 1637.75 |
02 | 3743.75 | 2426.75 | 1507.75 | 1753.75 |
03 | 3183.0 | 1614.0 | 1145.0 | 3490.0 |
04 | 156.0 | 749.0 | 58.0 | 8469.0 |
05 | 354.0 | 6028.0 | 0.0 | 3050.0 |
06 | 9250.0 | 0.0 | 182.0 | 0.0 |
07 | 0.0 | 9432.0 | 0.0 | 0.0 |
08 | 0.0 | 9432.0 | 0.0 | 0.0 |
09 | 639.0 | 0.0 | 8793.0 | 0.0 |
10 | 668.75 | 5991.75 | 1502.75 | 1268.75 |
11 | 2059.75 | 1555.75 | 4934.75 | 881.75 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.275 | 0.317 | 0.235 | 0.174 |
02 | 0.397 | 0.257 | 0.16 | 0.186 |
03 | 0.337 | 0.171 | 0.121 | 0.37 |
04 | 0.017 | 0.079 | 0.006 | 0.898 |
05 | 0.038 | 0.639 | 0.0 | 0.323 |
06 | 0.981 | 0.0 | 0.019 | 0.0 |
07 | 0.0 | 1.0 | 0.0 | 0.0 |
08 | 0.0 | 1.0 | 0.0 | 0.0 |
09 | 0.068 | 0.0 | 0.932 | 0.0 |
10 | 0.071 | 0.635 | 0.159 | 0.135 |
11 | 0.218 | 0.165 | 0.523 | 0.093 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.094 | 0.236 | -0.061 | -0.364 |
02 | 0.462 | 0.029 | -0.447 | -0.296 |
03 | 0.3 | -0.379 | -0.721 | 0.392 |
04 | -2.702 | -1.145 | -3.667 | 1.278 |
05 | -1.891 | 0.938 | -6.939 | 0.257 |
06 | 1.366 | -6.939 | -2.55 | -6.939 |
07 | -6.939 | 1.386 | -6.939 | -6.939 |
08 | -6.939 | 1.386 | -6.939 | -6.939 |
09 | -1.303 | -6.939 | 1.315 | -6.939 |
10 | -1.258 | 0.932 | -0.45 | -0.619 |
11 | -0.135 | -0.415 | 0.738 | -0.982 |
P-value | Threshold |
---|---|
0.001 | 4.501085 |
0.0005 | 5.696555 |
0.0001 | 7.661205 |