MotifZBT20.H12INVITRO.0.SM.B
Gene (human)ZBTB20
(GeneCards)
Gene synonyms (human)DPZF, ZNF288
Gene (mouse)Zbtb20
Gene synonyms (mouse)Zfp288
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length14
ConsensusnbSTATACRTYvnn
GC content38.95%
Information content (bits; total / per base)12.732 / 0.909
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words9680

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.994 0.99 0.989 0.983 0.97 0.96
best 0.995 0.991 0.991 0.985 0.971 0.962
Methyl HT-SELEX, 1 experiments median 0.993 0.988 0.988 0.981 0.97 0.959
best 0.993 0.988 0.988 0.981 0.97 0.959
Non-Methyl HT-SELEX, 1 experiments median 0.995 0.991 0.991 0.985 0.971 0.962
best 0.995 0.991 0.991 0.985 0.971 0.962
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZBTB20-like {2.3.3.14} (TFClass)
TFClass IDTFClass: 2.3.3.14.1
HGNCHGNC:13503
MGIMGI:1929213
EntrezGene (human)GeneID:26137
(SSTAR profile)
EntrezGene (mouse)GeneID:56490
(SSTAR profile)
UniProt ID (human)ZBT20_HUMAN
UniProt ID (mouse)ZBT20_MOUSE
UniProt AC (human)Q9HC78
(TFClass)
UniProt AC (mouse)Q8K0L9
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
013071.51970.51969.52668.5
02655.03401.01843.03781.0
031433.06649.01573.025.0
045.02514.08.07153.0
059251.04.079.0346.0
067.00.00.09673.0
079671.00.09.00.0
081.07571.02058.050.0
094336.072.05272.00.0
10157.037.025.09461.0
11913.02136.0176.06455.0
122910.02023.03427.01320.0
133567.52618.51907.51586.5
142570.252330.253117.251662.25
PFM
ACGT
010.3170.2040.2030.276
020.0680.3510.190.391
030.1480.6870.1630.003
040.0010.260.0010.739
050.9560.00.0080.036
060.0010.00.00.999
070.9990.00.0010.0
080.00.7820.2130.005
090.4480.0070.5450.0
100.0160.0040.0030.977
110.0940.2210.0180.667
120.3010.2090.3540.136
130.3690.2710.1970.164
140.2660.2410.3220.172
PWM
ACGT
010.238-0.205-0.2060.098
02-1.3040.34-0.2720.446
03-0.5231.01-0.43-4.486
04-5.8050.038-5.4611.083
051.34-5.953-3.394-1.939
06-5.563-6.962-6.9621.385
071.385-6.962-5.368-6.962
08-6.61.14-0.162-3.836
090.583-3.4840.778-6.962
10-2.722-4.121-4.4861.363
11-0.973-0.125-2.6090.98
120.184-0.1790.348-0.605
130.3880.079-0.238-0.422
140.06-0.0380.253-0.375
Standard thresholds
P-value Threshold
0.001 2.99726
0.0005 4.42096
0.0001 7.458965