MotifZBED5.H12INVIVO.0.P.C
Gene (human)ZBED5
(GeneCards)
Gene synonyms (human)Buster1
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length14
ConsensusbbbSRGMAMCvbbv
GC content60.29%
Information content (bits; total / per base)9.631 / 0.688
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (6) 0.773 0.798 0.657 0.685 0.714 0.74 2.246 2.435 114.682 159.62
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyBED zinc finger {2.3.5} (TFClass)
TF subfamily {2.3.5.0} (TFClass)
TFClass IDTFClass: 2.3.5.0.5
HGNCHGNC:30803
MGI
EntrezGene (human)GeneID:58486
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZBED5_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q49AG3
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
no
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0160.25358.25141.25440.25
0254.25335.25108.25502.25
0389.25167.25245.25498.25
0434.25428.25520.2517.25
05479.2513.25492.2515.25
0626.2511.25955.257.25
07687.25252.2554.256.25
08982.255.2510.252.25
09150.0704.0132.014.0
1054.0848.013.085.0
11312.0368.0224.096.0
12102.0492.0195.0211.0
13153.0175.0419.0253.0
14146.0230.0542.082.0
PFM
ACGT
010.060.3580.1410.44
020.0540.3350.1080.502
030.0890.1670.2450.498
040.0340.4280.520.017
050.4790.0130.4920.015
060.0260.0110.9550.007
070.6870.2520.0540.006
080.9820.0050.010.002
090.150.7040.1320.014
100.0540.8480.0130.085
110.3120.3680.2240.096
120.1020.4920.1950.211
130.1530.1750.4190.253
140.1460.230.5420.082
PWM
ACGT
01-1.4020.358-0.5660.563
02-1.5030.292-0.8280.694
03-1.018-0.399-0.0190.686
04-1.9450.5350.729-2.585
050.647-2.8220.674-2.696
06-2.197-2.9651.335-3.334
071.0070.009-1.503-3.452
081.363-3.586-3.045-4.148
09-0.5061.031-0.633-2.773
10-1.5081.217-2.839-1.066
110.220.384-0.109-0.946
12-0.8870.674-0.247-0.168
13-0.487-0.3540.5140.012
14-0.533-0.0830.77-1.101
Standard thresholds
P-value Threshold
0.001 4.85281
0.0005 5.68361
0.0001 7.31806