| Motif | ZBED5.H12INVIVO.0.P.C |
| Gene (human) | ZBED5 (GeneCards) |
| Gene synonyms (human) | Buster1 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | C |
| Motif | ZBED5.H12INVIVO.0.P.C |
| Gene (human) | ZBED5 (GeneCards) |
| Gene synonyms (human) | Buster1 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | C |
| Motif length | 14 |
| Consensus | bbbSRGMAMCvbbv |
| GC content | 60.29% |
| Information content (bits; total / per base) | 9.631 / 0.688 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (6) | 0.773 | 0.798 | 0.657 | 0.685 | 0.714 | 0.74 | 2.246 | 2.435 | 114.682 | 159.62 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | BED zinc finger {2.3.5} (TFClass) |
| TF subfamily | {2.3.5.0} (TFClass) |
| TFClass ID | TFClass: 2.3.5.0.5 |
| HGNC | HGNC:30803 |
| MGI | |
| EntrezGene (human) | GeneID:58486 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZBED5_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q49AG3 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | no |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZBED5.H12INVIVO.0.P.C.pcm |
| PWM | ZBED5.H12INVIVO.0.P.C.pwm |
| PFM | ZBED5.H12INVIVO.0.P.C.pfm |
| Alignment | ZBED5.H12INVIVO.0.P.C.words.tsv |
| Threshold to P-value map | ZBED5.H12INVIVO.0.P.C.thr |
| Motif in other formats | |
| JASPAR format | ZBED5.H12INVIVO.0.P.C_jaspar_format.txt |
| MEME format | ZBED5.H12INVIVO.0.P.C_meme_format.meme |
| Transfac format | ZBED5.H12INVIVO.0.P.C_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 60.25 | 358.25 | 141.25 | 440.25 |
| 02 | 54.25 | 335.25 | 108.25 | 502.25 |
| 03 | 89.25 | 167.25 | 245.25 | 498.25 |
| 04 | 34.25 | 428.25 | 520.25 | 17.25 |
| 05 | 479.25 | 13.25 | 492.25 | 15.25 |
| 06 | 26.25 | 11.25 | 955.25 | 7.25 |
| 07 | 687.25 | 252.25 | 54.25 | 6.25 |
| 08 | 982.25 | 5.25 | 10.25 | 2.25 |
| 09 | 150.0 | 704.0 | 132.0 | 14.0 |
| 10 | 54.0 | 848.0 | 13.0 | 85.0 |
| 11 | 312.0 | 368.0 | 224.0 | 96.0 |
| 12 | 102.0 | 492.0 | 195.0 | 211.0 |
| 13 | 153.0 | 175.0 | 419.0 | 253.0 |
| 14 | 146.0 | 230.0 | 542.0 | 82.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.06 | 0.358 | 0.141 | 0.44 |
| 02 | 0.054 | 0.335 | 0.108 | 0.502 |
| 03 | 0.089 | 0.167 | 0.245 | 0.498 |
| 04 | 0.034 | 0.428 | 0.52 | 0.017 |
| 05 | 0.479 | 0.013 | 0.492 | 0.015 |
| 06 | 0.026 | 0.011 | 0.955 | 0.007 |
| 07 | 0.687 | 0.252 | 0.054 | 0.006 |
| 08 | 0.982 | 0.005 | 0.01 | 0.002 |
| 09 | 0.15 | 0.704 | 0.132 | 0.014 |
| 10 | 0.054 | 0.848 | 0.013 | 0.085 |
| 11 | 0.312 | 0.368 | 0.224 | 0.096 |
| 12 | 0.102 | 0.492 | 0.195 | 0.211 |
| 13 | 0.153 | 0.175 | 0.419 | 0.253 |
| 14 | 0.146 | 0.23 | 0.542 | 0.082 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.402 | 0.358 | -0.566 | 0.563 |
| 02 | -1.503 | 0.292 | -0.828 | 0.694 |
| 03 | -1.018 | -0.399 | -0.019 | 0.686 |
| 04 | -1.945 | 0.535 | 0.729 | -2.585 |
| 05 | 0.647 | -2.822 | 0.674 | -2.696 |
| 06 | -2.197 | -2.965 | 1.335 | -3.334 |
| 07 | 1.007 | 0.009 | -1.503 | -3.452 |
| 08 | 1.363 | -3.586 | -3.045 | -4.148 |
| 09 | -0.506 | 1.031 | -0.633 | -2.773 |
| 10 | -1.508 | 1.217 | -2.839 | -1.066 |
| 11 | 0.22 | 0.384 | -0.109 | -0.946 |
| 12 | -0.887 | 0.674 | -0.247 | -0.168 |
| 13 | -0.487 | -0.354 | 0.514 | 0.012 |
| 14 | -0.533 | -0.083 | 0.77 | -1.101 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.85281 |
| 0.0005 | 5.68361 |
| 0.0001 | 7.31806 |