MotifZ354A.H12INVITRO.0.P.D
Gene (human)ZNF354A
(GeneCards)
Gene synonyms (human)EZNF, HKL1, TCF17
Gene (mouse)Znf354a
Gene synonyms (mouse)Kid1, Tcf17, Zfp354a
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length23
ConsensusYTTMRdYCATTTACATTTAWTGY
GC content25.78%
Information content (bits; total / per base)25.129 / 1.093
Data sourcesChIP-Seq
Aligned words676

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (9) 0.875 0.928 0.878 0.925 0.888 0.941 10.81 11.504 174.337 302.26
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF354A-like {2.3.3.64} (TFClass)
TFClass IDTFClass: 2.3.3.64.1
HGNCHGNC:11628
MGIMGI:103172
EntrezGene (human)GeneID:6940
(SSTAR profile)
EntrezGene (mouse)GeneID:21408
(SSTAR profile)
UniProt ID (human)Z354A_HUMAN
UniProt ID (mouse)Z354A_MOUSE
UniProt AC (human)O60765
(TFClass)
UniProt AC (mouse)Q61751
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0151.057.029.0539.0
0227.033.020.0596.0
0324.067.032.0553.0
04475.074.066.061.0
05198.014.0390.074.0
06222.073.096.0285.0
0754.0427.030.0165.0
0813.0619.04.040.0
09551.043.039.043.0
1026.035.017.0598.0
114.011.010.0651.0
1217.054.08.0597.0
13570.081.014.011.0
145.0502.014.0155.0
15570.011.064.031.0
1610.024.023.0619.0
173.013.026.0634.0
182.066.010.0598.0
19574.040.044.018.0
20426.019.0115.0116.0
2135.016.05.0620.0
2281.011.0546.038.0
2348.077.040.0511.0
PFM
ACGT
010.0750.0840.0430.797
020.040.0490.030.882
030.0360.0990.0470.818
040.7030.1090.0980.09
050.2930.0210.5770.109
060.3280.1080.1420.422
070.080.6320.0440.244
080.0190.9160.0060.059
090.8150.0640.0580.064
100.0380.0520.0250.885
110.0060.0160.0150.963
120.0250.080.0120.883
130.8430.120.0210.016
140.0070.7430.0210.229
150.8430.0160.0950.046
160.0150.0360.0340.916
170.0040.0190.0380.938
180.0030.0980.0150.885
190.8490.0590.0650.027
200.630.0280.170.172
210.0520.0240.0070.917
220.120.0160.8080.056
230.0710.1140.0590.756
PWM
ACGT
01-1.176-1.068-1.7181.153
02-1.785-1.595-2.0651.253
03-1.896-0.911-1.6241.179
041.027-0.814-0.925-1.002
050.157-2.390.831-0.814
060.27-0.827-0.5580.519
07-1.1210.921-1.685-0.024
08-2.4561.291-3.412-1.411
091.175-1.341-1.435-1.341
10-1.821-1.539-2.2151.257
11-3.412-2.603-2.6861.342
12-2.215-1.121-2.8751.255
131.209-0.725-2.39-2.603
14-3.2481.082-2.39-0.086
151.209-2.603-0.955-1.654
16-2.686-1.896-1.9361.291
17-3.607-2.456-1.8211.315
18-3.851-0.925-2.6861.257
191.216-1.411-1.319-2.162
200.919-2.113-0.38-0.372
21-1.539-2.27-3.2481.293
22-0.725-2.6031.166-1.46
23-1.235-0.775-1.4111.1
Standard thresholds
P-value Threshold
0.001 -0.97054
0.0005 0.43771
0.0001 3.45891