Z324A.H12INVITRO.0.P.D motif - HOmo sapiens COmprehensive MOdel COllection

Motif	Z324A.H12INVITRO.0.P.D
Gene (human)	ZNF324 (GeneCards)
Gene synonyms (human)	ZNF324A
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype	0
Quality	D

Motif length	24
Consensus	vddRTYRARCCWWCCYYdvMYbvh
GC content	49.32%
Information content (bits; total / per base)	16.092 / 0.67
Data sources	ChIP-Seq
Aligned words	998

ChIP-Seq benchmarking	Num. of experiments (peaksets)	auROC, median	auROC, best	auPRC, median	auPRC, best	pseudo-auROC, median	pseudo-auROC, best	pseudo-log-auROC, median	pseudo-log-auROC, best	Centrality, median	Centrality, best
Human	2 (9)	0.823	0.967	0.824	0.952	0.829	0.983	7.657	8.004	219.42	295.959

TF superclass	Zinc-coordinating DNA-binding domains {2} (TFClass)
TF class	C2H2 zinc finger factors {2.3} (TFClass)
TF family	More than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamily	ZNF324 {2.3.3.36} (TFClass)
TFClass ID	TFClass: 2.3.3.36.1
HGNC	HGNC:14096
MGI
EntrezGene (human)	GeneID:25799 (SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)	Z324A_HUMAN
UniProt ID (mouse)
UniProt AC (human)	O75467 (TFClass)
UniProt AC (mouse)
GRECO-DB-TF	yes

ChIP-Seq	2 human, 0 mouse
HT-SELEX	0
Methyl-HT-SELEX	0

PCM	Z324A.H12INVITRO.0.P.D.pcm
PWM	Z324A.H12INVITRO.0.P.D.pwm
PFM	Z324A.H12INVITRO.0.P.D.pfm
Alignment	Z324A.H12INVITRO.0.P.D.words.tsv
Threshold to P-value map	Z324A.H12INVITRO.0.P.D.thr
Motif in other formats
JASPAR format	Z324A.H12INVITRO.0.P.D_jaspar_format.txt
MEME format	Z324A.H12INVITRO.0.P.D_meme_format.meme
Transfac format	Z324A.H12INVITRO.0.P.D_transfac_format.txt
Homer format	Z324A.H12INVITRO.0.P.D_homer_format_0.001.txt Z324A.H12INVITRO.0.P.D_homer_format_0.0005.txt Z324A.H12INVITRO.0.P.D_homer_format_0.0001.txt

PCM

	A	C	G	T
01	356.25	152.25	383.25	106.25
02	241.25	100.25	334.25	322.25
03	156.25	72.25	396.25	373.25
04	575.25	190.25	209.25	23.25
05	43.25	90.25	39.25	825.25
06	15.25	570.25	149.25	263.25
07	548.25	89.25	322.25	38.25
08	804.25	120.25	41.25	32.25
09	722.25	25.25	208.25	42.25
10	17.25	852.25	37.25	91.25
11	20.25	857.25	25.25	95.25
12	774.25	71.25	63.25	89.25
13	99.25	28.25	83.25	787.25
14	10.0	936.0	34.0	18.0
15	70.0	846.0	19.0	63.0
16	61.0	166.0	24.0	747.0
17	53.0	151.0	67.0	727.0
18	165.0	82.0	371.0	380.0
19	182.0	230.0	424.0	162.0
20	209.0	644.0	65.0	80.0
21	100.0	184.0	48.0	666.0
22	75.0	137.0	472.0	314.0
23	125.0	388.0	364.0	121.0
24	196.0	568.0	81.0	153.0

PFM

	A	C	G	T
01	0.357	0.153	0.384	0.106
02	0.242	0.1	0.335	0.323
03	0.157	0.072	0.397	0.374
04	0.576	0.191	0.21	0.023
05	0.043	0.09	0.039	0.827
06	0.015	0.571	0.15	0.264
07	0.549	0.089	0.323	0.038
08	0.806	0.12	0.041	0.032
09	0.724	0.025	0.209	0.042
10	0.017	0.854	0.037	0.091
11	0.02	0.859	0.025	0.095
12	0.776	0.071	0.063	0.089
13	0.099	0.028	0.083	0.789
14	0.01	0.938	0.034	0.018
15	0.07	0.848	0.019	0.063
16	0.061	0.166	0.024	0.748
17	0.053	0.151	0.067	0.728
18	0.165	0.082	0.372	0.381
19	0.182	0.23	0.425	0.162
20	0.209	0.645	0.065	0.08
21	0.1	0.184	0.048	0.667
22	0.075	0.137	0.473	0.315
23	0.125	0.389	0.365	0.121
24	0.196	0.569	0.081	0.153

PWM

	A	C	G	T
01	0.354	-0.49	0.427	-0.844
02	-0.033	-0.902	0.291	0.254
03	-0.464	-1.223	0.46	0.401
04	0.831	-0.269	-0.175	-2.308
05	-1.72	-1.005	-1.813	1.191
06	-2.695	0.823	-0.509	0.053
07	0.784	-1.016	0.254	-1.838
08	1.166	-0.723	-1.766	-2.001
09	1.058	-2.231	-0.179	-1.743
10	-2.583	1.224	-1.863	-0.994
11	-2.436	1.229	-2.231	-0.952
12	1.128	-1.236	-1.352	-1.016
13	-0.911	-2.126	-1.084	1.144
14	-3.065	1.317	-1.95	-2.544
15	-1.253	1.216	-2.495	-1.356
16	-1.388	-0.404	-2.279	1.092
17	-1.524	-0.498	-1.296	1.065
18	-0.41	-1.099	0.394	0.418
19	-0.313	-0.081	0.527	-0.428
20	-0.176	0.944	-1.326	-1.123
21	-0.904	-0.302	-1.62	0.978
22	-1.186	-0.594	0.634	0.229
23	-0.684	0.439	0.376	-0.716
24	-0.239	0.819	-1.111	-0.485

Standard thresholds

P-value	Threshold
0.001	3.09296
0.0005	4.14441
0.0001	6.38501