MotifZ280A.H12CORE.0.P.B
Gene (human)ZNF280A
(GeneCards)
Gene synonyms (human)SUHW1, ZNF280, ZNF636
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length15
ConsensusbhvWRCAGRARRvWR
GC content46.54%
Information content (bits; total / per base)11.099 / 0.74
Data sourcesChIP-Seq
Aligned words1014

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (12) 0.676 0.772 0.542 0.678 0.695 0.799 2.11 2.988 43.161 102.745
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF280-like {2.3.3.4} (TFClass)
TFClass IDTFClass: 2.3.3.4.1
HGNCHGNC:18597
MGI
EntrezGene (human)GeneID:129025
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)Z280A_HUMAN
UniProt ID (mouse)
UniProt AC (human)P59817
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01148.0283.0168.0415.0
02395.0198.060.0361.0
03265.0452.0202.095.0
04268.021.0190.0535.0
05166.053.0761.034.0
0667.0846.032.069.0
07922.01.017.074.0
0832.030.0939.013.0
09757.094.0153.010.0
10860.06.0123.025.0
11352.04.0642.016.0
12386.019.0544.065.0
13225.0275.0385.0129.0
14674.0103.019.0218.0
15515.028.0430.041.0
PFM
ACGT
010.1460.2790.1660.409
020.390.1950.0590.356
030.2610.4460.1990.094
040.2640.0210.1870.528
050.1640.0520.750.034
060.0660.8340.0320.068
070.9090.0010.0170.073
080.0320.030.9260.013
090.7470.0930.1510.01
100.8480.0060.1210.025
110.3470.0040.6330.016
120.3810.0190.5360.064
130.2220.2710.380.127
140.6650.1020.0190.215
150.5080.0280.4240.04
PWM
ACGT
01-0.5330.109-0.4080.49
020.441-0.245-1.4190.351
030.0440.575-0.225-0.97
040.055-2.418-0.2860.743
05-0.42-1.541.095-1.966
06-1.3121.2-2.024-1.283
071.286-4.538-2.612-1.215
08-2.024-2.0851.304-2.852
091.089-0.981-0.5-3.08
101.217-3.497-0.716-2.256
110.326-3.7960.925-2.667
120.418-2.5110.76-1.342
13-0.1180.0810.416-0.669
140.974-0.891-2.511-0.15
150.705-2.150.526-1.787
Standard thresholds
P-value Threshold
0.001 4.46826
0.0005 5.36266
0.0001 7.20541