MotifWT1.H12INVIVO.0.P.B
Gene (human)WT1
(GeneCards)
Gene synonyms (human)
Gene (mouse)Wt1
Gene synonyms (mouse)Wt-1
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length10
ConsensusGKGGGAGKRn
GC content68.61%
Information content (bits; total / per base)11.97 / 1.197
Data sourcesChIP-Seq
Aligned words165

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (14) 0.677 0.815 0.51 0.646 0.628 0.875 1.592 2.954 22.357 154.155
Mouse 3 (17) 0.858 0.878 0.697 0.763 0.885 0.908 3.041 3.224 168.495 218.745
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.21
HGNCHGNC:12796
MGIMGI:98968
EntrezGene (human)GeneID:7490
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)WT1_HUMAN
UniProt ID (mouse)WT1_MOUSE
UniProt AC (human)P19544
(TFClass)
UniProt AC (mouse)P22561
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 3 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
015.00.0157.03.0
0221.01.072.071.0
0319.01.0144.01.0
043.00.0160.02.0
053.02.0160.00.0
06159.04.00.02.0
074.00.0160.01.0
0819.01.0115.030.0
0984.017.058.06.0
1052.026.054.033.0
PFM
ACGT
010.030.00.9520.018
020.1270.0060.4360.43
030.1150.0060.8730.006
040.0180.00.970.012
050.0180.0120.970.0
060.9640.0240.00.012
070.0240.00.970.006
080.1150.0060.6970.182
090.5090.1030.3520.036
100.3150.1580.3270.2
PWM
ACGT
01-1.913-3.5061.314-2.297
02-0.647-2.9270.5440.53
03-0.741-2.9271.229-2.927
04-2.297-3.5061.333-2.563
05-2.297-2.5631.333-3.506
061.327-2.087-3.506-2.563
07-2.087-3.5061.333-2.927
08-0.741-2.9271.006-0.307
090.696-0.8450.332-1.765
100.225-0.4440.262-0.216
Standard thresholds
P-value Threshold
0.001 4.44835
0.0005 5.270155
0.0001 7.158935