| Motif | WT1.H12INVITRO.0.P.D |
| Gene (human) | WT1 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Wt1 |
| Gene synonyms (mouse) | Wt-1 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | WT1.H12INVITRO.0.P.D |
| Gene (human) | WT1 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Wt1 |
| Gene synonyms (mouse) | Wt-1 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 10 |
| Consensus | GKGGGAGKRn |
| GC content | 68.61% |
| Information content (bits; total / per base) | 11.97 / 1.197 |
| Data sources | ChIP-Seq |
| Aligned words | 165 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (14) | 0.677 | 0.815 | 0.51 | 0.646 | 0.628 | 0.875 | 1.592 | 2.954 | 22.357 | 154.155 |
| Mouse | 3 (17) | 0.858 | 0.878 | 0.697 | 0.763 | 0.885 | 0.908 | 3.041 | 3.224 | 168.495 | 218.745 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.21 |
| HGNC | HGNC:12796 |
| MGI | MGI:98968 |
| EntrezGene (human) | GeneID:7490 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | WT1_HUMAN |
| UniProt ID (mouse) | WT1_MOUSE |
| UniProt AC (human) | P19544 (TFClass) |
| UniProt AC (mouse) | P22561 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 3 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | WT1.H12INVITRO.0.P.D.pcm |
| PWM | WT1.H12INVITRO.0.P.D.pwm |
| PFM | WT1.H12INVITRO.0.P.D.pfm |
| Alignment | WT1.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | WT1.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | WT1.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | WT1.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | WT1.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 5.0 | 0.0 | 157.0 | 3.0 |
| 02 | 21.0 | 1.0 | 72.0 | 71.0 |
| 03 | 19.0 | 1.0 | 144.0 | 1.0 |
| 04 | 3.0 | 0.0 | 160.0 | 2.0 |
| 05 | 3.0 | 2.0 | 160.0 | 0.0 |
| 06 | 159.0 | 4.0 | 0.0 | 2.0 |
| 07 | 4.0 | 0.0 | 160.0 | 1.0 |
| 08 | 19.0 | 1.0 | 115.0 | 30.0 |
| 09 | 84.0 | 17.0 | 58.0 | 6.0 |
| 10 | 52.0 | 26.0 | 54.0 | 33.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.03 | 0.0 | 0.952 | 0.018 |
| 02 | 0.127 | 0.006 | 0.436 | 0.43 |
| 03 | 0.115 | 0.006 | 0.873 | 0.006 |
| 04 | 0.018 | 0.0 | 0.97 | 0.012 |
| 05 | 0.018 | 0.012 | 0.97 | 0.0 |
| 06 | 0.964 | 0.024 | 0.0 | 0.012 |
| 07 | 0.024 | 0.0 | 0.97 | 0.006 |
| 08 | 0.115 | 0.006 | 0.697 | 0.182 |
| 09 | 0.509 | 0.103 | 0.352 | 0.036 |
| 10 | 0.315 | 0.158 | 0.327 | 0.2 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.913 | -3.506 | 1.314 | -2.297 |
| 02 | -0.647 | -2.927 | 0.544 | 0.53 |
| 03 | -0.741 | -2.927 | 1.229 | -2.927 |
| 04 | -2.297 | -3.506 | 1.333 | -2.563 |
| 05 | -2.297 | -2.563 | 1.333 | -3.506 |
| 06 | 1.327 | -2.087 | -3.506 | -2.563 |
| 07 | -2.087 | -3.506 | 1.333 | -2.927 |
| 08 | -0.741 | -2.927 | 1.006 | -0.307 |
| 09 | 0.696 | -0.845 | 0.332 | -1.765 |
| 10 | 0.225 | -0.444 | 0.262 | -0.216 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.44835 |
| 0.0005 | 5.270155 |
| 0.0001 | 7.158935 |