| Motif | UNC4.H12INVIVO.1.S.D |
| Gene (human) | UNCX (GeneCards) |
| Gene synonyms (human) | UNCX4.1 |
| Gene (mouse) | Uncx |
| Gene synonyms (mouse) | Uncx4.1 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | D |
| Motif | UNC4.H12INVIVO.1.S.D |
| Gene (human) | UNCX (GeneCards) |
| Gene synonyms (human) | UNCX4.1 |
| Gene (mouse) | Uncx |
| Gene synonyms (mouse) | Uncx4.1 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | D |
| Motif length | 12 |
| Consensus | nbYAATTARnbn |
| GC content | 29.55% |
| Information content (bits; total / per base) | 11.146 / 0.929 |
| Data sources | HT-SELEX |
| Aligned words | 9443 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 5 experiments | median | 0.959 | 0.927 | 0.947 | 0.912 | 0.91 | 0.874 |
| best | 0.987 | 0.976 | 0.98 | 0.967 | 0.936 | 0.923 | |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Homeo domain factors {3.1} (TFClass) |
| TF family | Paired-related HD {3.1.3} (TFClass) |
| TF subfamily | UNCX {3.1.3.27} (TFClass) |
| TFClass ID | TFClass: 3.1.3.27.1 |
| HGNC | HGNC:33194 |
| MGI | MGI:108013 |
| EntrezGene (human) | GeneID:340260 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:22255 (SSTAR profile) |
| UniProt ID (human) | UNC4_HUMAN |
| UniProt ID (mouse) | UNC4_MOUSE |
| UniProt AC (human) | A6NJT0 (TFClass) |
| UniProt AC (mouse) | O08934 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 5 |
| Methyl-HT-SELEX | 0 |
| PCM | UNC4.H12INVIVO.1.S.D.pcm |
| PWM | UNC4.H12INVIVO.1.S.D.pwm |
| PFM | UNC4.H12INVIVO.1.S.D.pfm |
| Alignment | UNC4.H12INVIVO.1.S.D.words.tsv |
| Threshold to P-value map | UNC4.H12INVIVO.1.S.D.thr |
| Motif in other formats | |
| JASPAR format | UNC4.H12INVIVO.1.S.D_jaspar_format.txt |
| MEME format | UNC4.H12INVIVO.1.S.D_meme_format.meme |
| Transfac format | UNC4.H12INVIVO.1.S.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2310.5 | 1903.5 | 2164.5 | 3064.5 |
| 02 | 1031.0 | 1854.0 | 2438.0 | 4120.0 |
| 03 | 413.0 | 3282.0 | 594.0 | 5154.0 |
| 04 | 8679.0 | 82.0 | 672.0 | 10.0 |
| 05 | 9443.0 | 0.0 | 0.0 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 9443.0 |
| 07 | 0.0 | 0.0 | 0.0 | 9443.0 |
| 08 | 9443.0 | 0.0 | 0.0 | 0.0 |
| 09 | 3149.0 | 679.0 | 5574.0 | 41.0 |
| 10 | 1524.0 | 2759.0 | 2154.0 | 3006.0 |
| 11 | 1146.0 | 2265.0 | 2501.0 | 3531.0 |
| 12 | 2090.5 | 2264.5 | 2297.5 | 2790.5 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.245 | 0.202 | 0.229 | 0.325 |
| 02 | 0.109 | 0.196 | 0.258 | 0.436 |
| 03 | 0.044 | 0.348 | 0.063 | 0.546 |
| 04 | 0.919 | 0.009 | 0.071 | 0.001 |
| 05 | 1.0 | 0.0 | 0.0 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 1.0 |
| 07 | 0.0 | 0.0 | 0.0 | 1.0 |
| 08 | 1.0 | 0.0 | 0.0 | 0.0 |
| 09 | 0.333 | 0.072 | 0.59 | 0.004 |
| 10 | 0.161 | 0.292 | 0.228 | 0.318 |
| 11 | 0.121 | 0.24 | 0.265 | 0.374 |
| 12 | 0.221 | 0.24 | 0.243 | 0.296 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.021 | -0.215 | -0.087 | 0.261 |
| 02 | -0.827 | -0.241 | 0.032 | 0.556 |
| 03 | -1.739 | 0.329 | -1.377 | 0.78 |
| 04 | 1.301 | -3.333 | -1.254 | -5.259 |
| 05 | 1.386 | -6.94 | -6.94 | -6.94 |
| 06 | -6.94 | -6.94 | -6.94 | 1.386 |
| 07 | -6.94 | -6.94 | -6.94 | 1.386 |
| 08 | 1.386 | -6.94 | -6.94 | -6.94 |
| 09 | 0.288 | -1.244 | 0.859 | -4.0 |
| 10 | -0.437 | 0.156 | -0.092 | 0.241 |
| 11 | -0.722 | -0.041 | 0.058 | 0.402 |
| 12 | -0.121 | -0.042 | -0.027 | 0.167 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.95867 |
| 0.0005 | 5.67809 |
| 0.0001 | 7.9282 |