MotifUNC4.H12INVIVO.1.S.D
Gene (human)UNCX
(GeneCards)
Gene synonyms (human)UNCX4.1
Gene (mouse)Uncx
Gene synonyms (mouse)Uncx4.1
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
D
Motif length12
ConsensusnbYAATTARnbn
GC content29.55%
Information content (bits; total / per base)11.146 / 0.929
Data sourcesHT-SELEX
Aligned words9443

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 5 experiments median 0.959 0.927 0.947 0.912 0.91 0.874
best 0.987 0.976 0.98 0.967 0.936 0.923
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHomeo domain factors {3.1} (TFClass)
TF familyPaired-related HD {3.1.3} (TFClass)
TF subfamilyUNCX {3.1.3.27} (TFClass)
TFClass IDTFClass: 3.1.3.27.1
HGNCHGNC:33194
MGIMGI:108013
EntrezGene (human)GeneID:340260
(SSTAR profile)
EntrezGene (mouse)GeneID:22255
(SSTAR profile)
UniProt ID (human)UNC4_HUMAN
UniProt ID (mouse)UNC4_MOUSE
UniProt AC (human)A6NJT0
(TFClass)
UniProt AC (mouse)O08934
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 5
Methyl-HT-SELEX 0
PCM
ACGT
012310.51903.52164.53064.5
021031.01854.02438.04120.0
03413.03282.0594.05154.0
048679.082.0672.010.0
059443.00.00.00.0
060.00.00.09443.0
070.00.00.09443.0
089443.00.00.00.0
093149.0679.05574.041.0
101524.02759.02154.03006.0
111146.02265.02501.03531.0
122090.52264.52297.52790.5
PFM
ACGT
010.2450.2020.2290.325
020.1090.1960.2580.436
030.0440.3480.0630.546
040.9190.0090.0710.001
051.00.00.00.0
060.00.00.01.0
070.00.00.01.0
081.00.00.00.0
090.3330.0720.590.004
100.1610.2920.2280.318
110.1210.240.2650.374
120.2210.240.2430.296
PWM
ACGT
01-0.021-0.215-0.0870.261
02-0.827-0.2410.0320.556
03-1.7390.329-1.3770.78
041.301-3.333-1.254-5.259
051.386-6.94-6.94-6.94
06-6.94-6.94-6.941.386
07-6.94-6.94-6.941.386
081.386-6.94-6.94-6.94
090.288-1.2440.859-4.0
10-0.4370.156-0.0920.241
11-0.722-0.0410.0580.402
12-0.121-0.042-0.0270.167
Standard thresholds
P-value Threshold
0.001 3.95867
0.0005 5.67809
0.0001 7.9282