MotifTYY2.H12INVIVO.1.SM.B
Gene (human)YY2
(GeneCards)
Gene synonyms (human)ZNF631
Gene (mouse)Yy2
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
B
Motif length14
ConsensusnhAAAATGGCSGhn
GC content51.75%
Information content (bits; total / per base)16.561 / 1.183
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words9927

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (12) 0.846 0.886 0.779 0.836 0.839 0.88 3.836 4.182 130.746 389.921

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 6 experiments median 0.969 0.959 0.827 0.837 0.676 0.708
best 1.0 1.0 1.0 1.0 0.854 0.879
Methyl HT-SELEX, 1 experiments median 0.999 0.999 0.797 0.826 0.639 0.689
best 0.999 0.999 0.797 0.826 0.639 0.689
Non-Methyl HT-SELEX, 5 experiments median 0.966 0.956 0.858 0.848 0.713 0.728
best 1.0 1.0 1.0 1.0 0.854 0.879
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyYY1-like {2.3.3.9} (TFClass)
TFClass IDTFClass: 2.3.3.9.2
HGNCHGNC:31684
MGIMGI:3837947
EntrezGene (human)GeneID:404281
(SSTAR profile)
EntrezGene (mouse)GeneID:100073351
(SSTAR profile)
UniProt ID (human)TYY2_HUMAN
UniProt ID (mouse)TYY2_MOUSE
UniProt AC (human)O15391
(TFClass)
UniProt AC (mouse)Q3TTC2
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 5
Methyl-HT-SELEX 1
PCM
ACGT
012360.52356.51504.53705.5
021366.05570.01069.01922.0
039230.0153.0380.0164.0
049370.0105.0312.0140.0
058673.0109.01081.064.0
069792.010.0103.022.0
078.07.043.09869.0
0824.025.09872.06.0
0952.051.09759.065.0
10312.09295.0145.0175.0
11262.02449.06787.0429.0
12334.0265.08920.0408.0
132677.754745.751076.751426.75
141899.753950.751770.752305.75
PFM
ACGT
010.2380.2370.1520.373
020.1380.5610.1080.194
030.930.0150.0380.017
040.9440.0110.0310.014
050.8740.0110.1090.006
060.9860.0010.010.002
070.0010.0010.0040.994
080.0020.0030.9940.001
090.0050.0050.9830.007
100.0310.9360.0150.018
110.0260.2470.6840.043
120.0340.0270.8990.041
130.270.4780.1080.144
140.1910.3980.1780.232
PWM
ACGT
01-0.05-0.052-0.50.401
02-0.5960.808-0.841-0.255
031.313-2.772-1.871-2.704
041.328-3.142-2.067-2.86
051.251-3.105-0.83-3.623
061.372-5.308-3.161-4.627
07-5.485-5.588-4.0041.38
08-4.548-4.5111.38-5.701
09-3.823-3.8421.369-3.608
10-2.0671.32-2.825-2.64
11-2.241-0.0131.005-1.751
12-2.0-2.2291.279-1.801
130.0760.648-0.834-0.553
14-0.2670.465-0.337-0.073
Standard thresholds
P-value Threshold
0.001 1.45031
0.0005 2.86816
0.0001 5.77051