MotifTYY2.H12INVIVO.0.PS.A
Gene (human)YY2
(GeneCards)
Gene synonyms (human)ZNF631
Gene (mouse)Yy2
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
A
Motif length12
ConsensusvRMvATGGCSGC
GC content62.31%
Information content (bits; total / per base)14.642 / 1.22
Data sourcesChIP-Seq + HT-SELEX
Aligned words980

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (12) 0.911 0.958 0.859 0.921 0.891 0.952 4.699 5.227 179.489 553.092

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 6 experiments median 0.979 0.97 0.845 0.852 0.693 0.722
best 1.0 0.999 0.998 0.998 0.862 0.883
Methyl HT-SELEX, 1 experiments median 0.995 0.993 0.804 0.827 0.65 0.693
best 0.995 0.993 0.804 0.827 0.65 0.693
Non-Methyl HT-SELEX, 5 experiments median 0.976 0.966 0.887 0.877 0.735 0.75
best 1.0 0.999 0.998 0.998 0.862 0.883
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyYY1-like {2.3.3.9} (TFClass)
TFClass IDTFClass: 2.3.3.9.2
HGNCHGNC:31684
MGIMGI:3837947
EntrezGene (human)GeneID:404281
(SSTAR profile)
EntrezGene (mouse)GeneID:100073351
(SSTAR profile)
UniProt ID (human)TYY2_HUMAN
UniProt ID (mouse)TYY2_MOUSE
UniProt AC (human)O15391
(TFClass)
UniProt AC (mouse)Q3TTC2
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 5
Methyl-HT-SELEX 1
PCM
ACGT
01168.0492.0215.0105.0
02724.024.0212.020.0
03643.0135.068.0134.0
04234.0283.0417.046.0
05977.00.02.01.0
062.02.01.0975.0
070.00.0980.00.0
083.05.0968.04.0
0921.0945.00.014.0
1051.0103.0739.087.0
1141.058.0832.049.0
1284.0822.025.049.0
PFM
ACGT
010.1710.5020.2190.107
020.7390.0240.2160.02
030.6560.1380.0690.137
040.2390.2890.4260.047
050.9970.00.0020.001
060.0020.0020.0010.995
070.00.01.00.0
080.0030.0050.9880.004
090.0210.9640.00.014
100.0520.1050.7540.089
110.0420.0590.8490.05
120.0860.8390.0260.05
PWM
ACGT
01-0.3740.694-0.13-0.838
021.079-2.261-0.144-2.43
030.961-0.59-1.264-0.598
04-0.0460.1430.529-1.643
051.378-4.965-4.194-4.507
06-4.194-4.194-4.5071.376
07-4.965-4.9651.381-4.965
08-3.956-3.6031.369-3.764
09-2.3851.345-4.965-2.753
10-1.543-0.8571.099-1.023
11-1.754-1.4191.218-1.582
12-1.0571.206-2.223-1.582
Standard thresholds
P-value Threshold
0.001 2.741175
0.0005 4.04219
0.0001 6.69332