| Motif | TFDP1.H12INVITRO.0.P.D |
| Gene (human) | TFDP1 (GeneCards) |
| Gene synonyms (human) | DP1 |
| Gene (mouse) | Tfdp1 |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | TFDP1.H12INVITRO.0.P.D |
| Gene (human) | TFDP1 (GeneCards) |
| Gene synonyms (human) | DP1 |
| Gene (mouse) | Tfdp1 |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 11 |
| Consensus | nbSGCGGGRvv |
| GC content | 72.75% |
| Information content (bits; total / per base) | 9.267 / 0.842 |
| Data sources | ChIP-Seq |
| Aligned words | 992 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 4 (26) | 0.793 | 0.861 | 0.639 | 0.724 | 0.786 | 0.88 | 2.508 | 3.002 | 93.569 | 179.387 |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Fork head/winged helix factors {3.3} (TFClass) |
| TF family | E2F {3.3.2} (TFClass) |
| TF subfamily | DP1 {3.3.2.2} (TFClass) |
| TFClass ID | TFClass: 3.3.2.2.1 |
| HGNC | HGNC:11749 |
| MGI | MGI:101934 |
| EntrezGene (human) | GeneID:7027 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:21781 (SSTAR profile) |
| UniProt ID (human) | TFDP1_HUMAN |
| UniProt ID (mouse) | TFDP1_MOUSE |
| UniProt AC (human) | Q14186 (TFClass) |
| UniProt AC (mouse) | Q08639 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 4 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | TFDP1.H12INVITRO.0.P.D.pcm |
| PWM | TFDP1.H12INVITRO.0.P.D.pwm |
| PFM | TFDP1.H12INVITRO.0.P.D.pfm |
| Alignment | TFDP1.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | TFDP1.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | TFDP1.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | TFDP1.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | TFDP1.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 274.0 | 186.0 | 334.0 | 198.0 |
| 02 | 136.0 | 139.0 | 551.0 | 166.0 |
| 03 | 102.0 | 232.0 | 651.0 | 7.0 |
| 04 | 4.0 | 49.0 | 931.0 | 8.0 |
| 05 | 46.0 | 925.0 | 3.0 | 18.0 |
| 06 | 38.0 | 12.0 | 924.0 | 18.0 |
| 07 | 16.0 | 171.0 | 798.0 | 7.0 |
| 08 | 73.0 | 83.0 | 815.0 | 21.0 |
| 09 | 717.0 | 88.0 | 143.0 | 44.0 |
| 10 | 551.0 | 129.0 | 253.0 | 59.0 |
| 11 | 345.0 | 231.0 | 290.0 | 126.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.276 | 0.188 | 0.337 | 0.2 |
| 02 | 0.137 | 0.14 | 0.555 | 0.167 |
| 03 | 0.103 | 0.234 | 0.656 | 0.007 |
| 04 | 0.004 | 0.049 | 0.939 | 0.008 |
| 05 | 0.046 | 0.932 | 0.003 | 0.018 |
| 06 | 0.038 | 0.012 | 0.931 | 0.018 |
| 07 | 0.016 | 0.172 | 0.804 | 0.007 |
| 08 | 0.074 | 0.084 | 0.822 | 0.021 |
| 09 | 0.723 | 0.089 | 0.144 | 0.044 |
| 10 | 0.555 | 0.13 | 0.255 | 0.059 |
| 11 | 0.348 | 0.233 | 0.292 | 0.127 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.099 | -0.285 | 0.296 | -0.223 |
| 02 | -0.595 | -0.574 | 0.795 | -0.398 |
| 03 | -0.879 | -0.066 | 0.961 | -3.354 |
| 04 | -3.776 | -1.594 | 1.318 | -3.246 |
| 05 | -1.655 | 1.311 | -3.968 | -2.538 |
| 06 | -1.838 | -2.901 | 1.31 | -2.538 |
| 07 | -2.645 | -0.369 | 1.164 | -3.354 |
| 08 | -1.207 | -1.081 | 1.185 | -2.397 |
| 09 | 1.057 | -1.024 | -0.546 | -1.698 |
| 10 | 0.795 | -0.647 | 0.02 | -1.414 |
| 11 | 0.328 | -0.071 | 0.155 | -0.67 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.88837 |
| 0.0005 | 5.6875 |
| 0.0001 | 7.292205 |