MotifTEAD3.H12INVITRO.0.PS.A
Gene (human)TEAD3
(GeneCards)
Gene synonyms (human)TEAD5, TEF5
Gene (mouse)Tead3
Gene synonyms (mouse)Tcf13r2, Tef5
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
A
Motif length13
ConsensusbhRCATTCCWSvv
GC content51.83%
Information content (bits; total / per base)12.028 / 0.925
Data sourcesChIP-Seq + HT-SELEX
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (7) 0.907 0.917 0.842 0.863 0.901 0.911 3.87 4.099 374.824 474.796

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.982 0.969 0.957 0.942 0.88 0.873
best 0.993 0.988 0.99 0.983 0.965 0.956
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classTEA domain factors {3.6} (TFClass)
TF familyTEF1-related {3.6.1} (TFClass)
TF subfamily {3.6.1.0} (TFClass)
TFClass IDTFClass: 3.6.1.0.4
HGNCHGNC:11716
MGIMGI:109241
EntrezGene (human)GeneID:7005
(SSTAR profile)
EntrezGene (mouse)GeneID:21678
(SSTAR profile)
UniProt ID (human)TEAD3_HUMAN
UniProt ID (mouse)TEAD3_MOUSE
UniProt AC (human)Q99594
(TFClass)
UniProt AC (mouse)P70210
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
01151.0402.0177.0270.0
02147.0405.0131.0317.0
03499.019.0424.058.0
04103.0862.035.00.0
05956.014.022.08.0
064.01.09.0986.0
0758.07.033.0902.0
081.0975.09.015.0
092.0933.00.065.0
10486.045.040.0429.0
11112.0136.0634.0118.0
12187.0364.0331.0118.0
13187.0483.0247.083.0
PFM
ACGT
010.1510.4020.1770.27
020.1470.4050.1310.317
030.4990.0190.4240.058
040.1030.8620.0350.0
050.9560.0140.0220.008
060.0040.0010.0090.986
070.0580.0070.0330.902
080.0010.9750.0090.015
090.0020.9330.00.065
100.4860.0450.040.429
110.1120.1360.6340.118
120.1870.3640.3310.118
130.1870.4830.2470.083
PWM
ACGT
01-0.50.472-0.3420.076
02-0.5260.48-0.640.236
030.688-2.4970.525-1.439
04-0.8771.233-1.925-4.982
051.336-2.773-2.362-3.253
06-3.783-4.525-3.1561.367
07-1.439-3.362-1.9811.278
08-4.5251.356-3.156-2.711
09-4.2131.312-4.982-1.328
100.661-1.684-1.7970.537
11-0.795-0.6030.926-0.743
12-0.2880.3740.279-0.743
13-0.2880.655-0.012-1.089
Standard thresholds
P-value Threshold
0.001 4.08666
0.0005 5.138065
0.0001 7.258815