MotifTBX15.H12INVIVO.0.SM.D
Gene (human)TBX15
(GeneCards)
Gene synonyms (human)TBX14
Gene (mouse)Tbx15
Gene synonyms (mouse)Tbx14, Tbx8
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length13
ConsensusndAGGTGTbAdnn
GC content49.98%
Information content (bits; total / per base)11.139 / 0.857
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words8404

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.971 0.953 0.949 0.924 0.914 0.883
best 0.974 0.956 0.956 0.933 0.924 0.895
Methyl HT-SELEX, 1 experiments median 0.968 0.95 0.942 0.916 0.903 0.87
best 0.968 0.95 0.942 0.916 0.903 0.87
Non-Methyl HT-SELEX, 1 experiments median 0.974 0.956 0.956 0.933 0.924 0.895
best 0.974 0.956 0.956 0.933 0.924 0.895
TF superclassImmunoglobulin fold {6} (TFClass)
TF classT-Box factors {6.5} (TFClass)
TF familyTBX1-related {6.5.3} (TFClass)
TF subfamily {6.5.3.0} (TFClass)
TFClass IDTFClass: 6.5.3.0.3
HGNCHGNC:11594
MGIMGI:1277234
EntrezGene (human)GeneID:6913
(SSTAR profile)
EntrezGene (mouse)GeneID:21384
(SSTAR profile)
UniProt ID (human)TBX15_HUMAN
UniProt ID (mouse)TBX15_MOUSE
UniProt AC (human)Q96SF7
(TFClass)
UniProt AC (mouse)O70306
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
011787.51679.52259.52677.5
023336.0677.02375.02016.0
036703.066.01054.0581.0
0499.0291.08000.014.0
051.00.08403.00.0
060.02046.00.06358.0
070.00.08404.00.0
08754.0570.052.07028.0
09140.01882.03916.02466.0
107027.031.01172.0174.0
113423.01372.01573.02036.0
122218.751663.753113.751407.75
131869.01152.02856.02527.0
PFM
ACGT
010.2130.20.2690.319
020.3970.0810.2830.24
030.7980.0080.1250.069
040.0120.0350.9520.002
050.00.01.00.0
060.00.2430.00.757
070.00.01.00.0
080.090.0680.0060.836
090.0170.2240.4660.293
100.8360.0040.1390.021
110.4070.1630.1870.242
120.2640.1980.3710.168
130.2220.1370.340.301
PWM
ACGT
01-0.161-0.2240.0730.242
020.462-1.130.122-0.041
031.159-3.428-0.689-1.283
04-3.034-1.971.336-4.863
05-6.47-6.8361.385-6.836
06-6.836-0.026-6.8361.107
07-6.836-6.8361.385-6.836
08-1.023-1.302-3.6571.207
09-2.694-0.110.6220.16
101.207-4.147-0.583-2.479
110.488-0.426-0.289-0.031
120.054-0.2330.393-0.4
13-0.117-0.60.3070.184
Standard thresholds
P-value Threshold
0.001 4.38406
0.0005 5.505765
0.0001 7.52482