| Motif | STAT6.H12INVIVO.0.P.B |
| Gene (human) | STAT6 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Stat6 |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | STAT6.H12INVIVO.0.P.B |
| Gene (human) | STAT6 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Stat6 |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 13 |
| Consensus | TTCYYWRGAAnhv |
| GC content | 40.69% |
| Information content (bits; total / per base) | 13.095 / 1.007 |
| Data sources | ChIP-Seq |
| Aligned words | 998 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 3 (15) | 0.72 | 0.843 | 0.599 | 0.753 | 0.658 | 0.801 | 1.901 | 2.65 | 51.229 | 168.377 |
| Mouse | 18 (101) | 0.904 | 0.95 | 0.824 | 0.895 | 0.878 | 0.932 | 3.332 | 3.808 | 273.745 | 447.678 |
| TF superclass | Immunoglobulin fold {6} (TFClass) |
| TF class | STAT domain factors {6.2} (TFClass) |
| TF family | STAT {6.2.1} (TFClass) |
| TF subfamily | {6.2.1.0} (TFClass) |
| TFClass ID | TFClass: 6.2.1.0.7 |
| HGNC | HGNC:11368 |
| MGI | MGI:103034 |
| EntrezGene (human) | GeneID:6778 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:20852 (SSTAR profile) |
| UniProt ID (human) | STAT6_HUMAN |
| UniProt ID (mouse) | STAT6_MOUSE |
| UniProt AC (human) | P42226 (TFClass) |
| UniProt AC (mouse) | P52633 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 3 human, 18 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | STAT6.H12INVIVO.0.P.B.pcm |
| PWM | STAT6.H12INVIVO.0.P.B.pwm |
| PFM | STAT6.H12INVIVO.0.P.B.pfm |
| Alignment | STAT6.H12INVIVO.0.P.B.words.tsv |
| Threshold to P-value map | STAT6.H12INVIVO.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | STAT6.H12INVIVO.0.P.B_jaspar_format.txt |
| MEME format | STAT6.H12INVIVO.0.P.B_meme_format.meme |
| Transfac format | STAT6.H12INVIVO.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 4.0 | 7.0 | 9.0 | 978.0 |
| 02 | 13.0 | 4.0 | 2.0 | 979.0 |
| 03 | 55.0 | 833.0 | 3.0 | 107.0 |
| 04 | 88.0 | 382.0 | 21.0 | 507.0 |
| 05 | 17.0 | 507.0 | 229.0 | 245.0 |
| 06 | 448.0 | 137.0 | 10.0 | 403.0 |
| 07 | 292.0 | 3.0 | 665.0 | 38.0 |
| 08 | 7.0 | 1.0 | 965.0 | 25.0 |
| 09 | 993.0 | 1.0 | 0.0 | 4.0 |
| 10 | 986.0 | 0.0 | 9.0 | 3.0 |
| 11 | 376.0 | 195.0 | 265.0 | 162.0 |
| 12 | 211.0 | 190.0 | 173.0 | 424.0 |
| 13 | 207.0 | 288.0 | 380.0 | 123.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.004 | 0.007 | 0.009 | 0.98 |
| 02 | 0.013 | 0.004 | 0.002 | 0.981 |
| 03 | 0.055 | 0.835 | 0.003 | 0.107 |
| 04 | 0.088 | 0.383 | 0.021 | 0.508 |
| 05 | 0.017 | 0.508 | 0.229 | 0.245 |
| 06 | 0.449 | 0.137 | 0.01 | 0.404 |
| 07 | 0.293 | 0.003 | 0.666 | 0.038 |
| 08 | 0.007 | 0.001 | 0.967 | 0.025 |
| 09 | 0.995 | 0.001 | 0.0 | 0.004 |
| 10 | 0.988 | 0.0 | 0.009 | 0.003 |
| 11 | 0.377 | 0.195 | 0.266 | 0.162 |
| 12 | 0.211 | 0.19 | 0.173 | 0.425 |
| 13 | 0.207 | 0.289 | 0.381 | 0.123 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -3.781 | -3.36 | -3.154 | 1.361 |
| 02 | -2.837 | -3.781 | -4.211 | 1.362 |
| 03 | -1.488 | 1.201 | -3.973 | -0.838 |
| 04 | -1.03 | 0.424 | -2.403 | 0.706 |
| 05 | -2.596 | 0.706 | -0.085 | -0.018 |
| 06 | 0.582 | -0.594 | -3.065 | 0.477 |
| 07 | 0.156 | -3.973 | 0.976 | -1.844 |
| 08 | -3.36 | -4.523 | 1.348 | -2.241 |
| 09 | 1.376 | -4.523 | -4.98 | -3.781 |
| 10 | 1.369 | -4.98 | -3.154 | -3.973 |
| 11 | 0.408 | -0.245 | 0.06 | -0.428 |
| 12 | -0.166 | -0.27 | -0.363 | 0.527 |
| 13 | -0.185 | 0.143 | 0.418 | -0.7 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.41386 |
| 0.0005 | 4.59481 |
| 0.0001 | 7.076925 |