| Motif | STAT4.H12INVITRO.0.P.D |
| Gene (human) | STAT4 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Stat4 |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | STAT4.H12INVITRO.0.P.D |
| Gene (human) | STAT4 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Stat4 |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 11 |
| Consensus | bTTCYCRKAAv |
| GC content | 43.45% |
| Information content (bits; total / per base) | 10.534 / 0.958 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (10) | 0.732 | 0.831 | 0.632 | 0.725 | 0.738 | 0.826 | 2.297 | 2.743 | 83.146 | 209.824 |
| Mouse | 5 (33) | 0.793 | 0.888 | 0.716 | 0.807 | 0.8 | 0.887 | 2.745 | 3.309 | 168.092 | 367.538 |
| TF superclass | Immunoglobulin fold {6} (TFClass) |
| TF class | STAT domain factors {6.2} (TFClass) |
| TF family | STAT {6.2.1} (TFClass) |
| TF subfamily | {6.2.1.0} (TFClass) |
| TFClass ID | TFClass: 6.2.1.0.4 |
| HGNC | HGNC:11365 |
| MGI | MGI:103062 |
| EntrezGene (human) | GeneID:6775 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:20849 (SSTAR profile) |
| UniProt ID (human) | STAT4_HUMAN |
| UniProt ID (mouse) | STAT4_MOUSE |
| UniProt AC (human) | Q14765 (TFClass) |
| UniProt AC (mouse) | P42228 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 5 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | STAT4.H12INVITRO.0.P.D.pcm |
| PWM | STAT4.H12INVITRO.0.P.D.pwm |
| PFM | STAT4.H12INVITRO.0.P.D.pfm |
| Alignment | STAT4.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | STAT4.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | STAT4.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | STAT4.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | STAT4.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 75.0 | 309.0 | 148.0 | 468.0 |
| 02 | 11.0 | 15.0 | 7.0 | 967.0 |
| 03 | 14.0 | 13.0 | 74.0 | 899.0 |
| 04 | 82.0 | 876.0 | 9.0 | 33.0 |
| 05 | 52.0 | 697.0 | 10.0 | 241.0 |
| 06 | 0.0 | 503.0 | 0.0 | 497.0 |
| 07 | 308.0 | 61.0 | 557.0 | 74.0 |
| 08 | 40.0 | 23.0 | 728.0 | 209.0 |
| 09 | 779.0 | 159.0 | 14.0 | 48.0 |
| 10 | 896.0 | 25.0 | 53.0 | 26.0 |
| 11 | 400.0 | 143.0 | 355.0 | 102.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.075 | 0.309 | 0.148 | 0.468 |
| 02 | 0.011 | 0.015 | 0.007 | 0.967 |
| 03 | 0.014 | 0.013 | 0.074 | 0.899 |
| 04 | 0.082 | 0.876 | 0.009 | 0.033 |
| 05 | 0.052 | 0.697 | 0.01 | 0.241 |
| 06 | 0.0 | 0.503 | 0.0 | 0.497 |
| 07 | 0.308 | 0.061 | 0.557 | 0.074 |
| 08 | 0.04 | 0.023 | 0.728 | 0.209 |
| 09 | 0.779 | 0.159 | 0.014 | 0.048 |
| 10 | 0.896 | 0.025 | 0.053 | 0.026 |
| 11 | 0.4 | 0.143 | 0.355 | 0.102 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.188 | 0.211 | -0.52 | 0.624 |
| 02 | -2.985 | -2.711 | -3.362 | 1.348 |
| 03 | -2.773 | -2.839 | -1.201 | 1.275 |
| 04 | -1.101 | 1.249 | -3.156 | -1.981 |
| 05 | -1.544 | 1.021 | -3.066 | -0.036 |
| 06 | -4.982 | 0.696 | -4.982 | 0.684 |
| 07 | 0.207 | -1.39 | 0.797 | -1.201 |
| 08 | -1.797 | -2.32 | 1.064 | -0.178 |
| 09 | 1.132 | -0.449 | -2.773 | -1.622 |
| 10 | 1.272 | -2.243 | -1.526 | -2.206 |
| 11 | 0.467 | -0.553 | 0.349 | -0.887 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.61529 |
| 0.0005 | 5.497755 |
| 0.0001 | 7.318975 |