MotifSTAT4.H12CORE.0.P.B
Gene (human)STAT4
(GeneCards)
Gene synonyms (human)
Gene (mouse)Stat4
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length11
ConsensusbTTCYCRKAAv
GC content43.45%
Information content (bits; total / per base)10.534 / 0.958
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (10) 0.732 0.831 0.632 0.725 0.738 0.826 2.297 2.743 83.146 209.824
Mouse 5 (33) 0.793 0.888 0.716 0.807 0.8 0.887 2.745 3.309 168.092 367.538
TF superclassImmunoglobulin fold {6} (TFClass)
TF classSTAT domain factors {6.2} (TFClass)
TF familySTAT {6.2.1} (TFClass)
TF subfamily {6.2.1.0} (TFClass)
TFClass IDTFClass: 6.2.1.0.4
HGNCHGNC:11365
MGIMGI:103062
EntrezGene (human)GeneID:6775
(SSTAR profile)
EntrezGene (mouse)GeneID:20849
(SSTAR profile)
UniProt ID (human)STAT4_HUMAN
UniProt ID (mouse)STAT4_MOUSE
UniProt AC (human)Q14765
(TFClass)
UniProt AC (mouse)P42228
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 5 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0175.0309.0148.0468.0
0211.015.07.0967.0
0314.013.074.0899.0
0482.0876.09.033.0
0552.0697.010.0241.0
060.0503.00.0497.0
07308.061.0557.074.0
0840.023.0728.0209.0
09779.0159.014.048.0
10896.025.053.026.0
11400.0143.0355.0102.0
PFM
ACGT
010.0750.3090.1480.468
020.0110.0150.0070.967
030.0140.0130.0740.899
040.0820.8760.0090.033
050.0520.6970.010.241
060.00.5030.00.497
070.3080.0610.5570.074
080.040.0230.7280.209
090.7790.1590.0140.048
100.8960.0250.0530.026
110.40.1430.3550.102
PWM
ACGT
01-1.1880.211-0.520.624
02-2.985-2.711-3.3621.348
03-2.773-2.839-1.2011.275
04-1.1011.249-3.156-1.981
05-1.5441.021-3.066-0.036
06-4.9820.696-4.9820.684
070.207-1.390.797-1.201
08-1.797-2.321.064-0.178
091.132-0.449-2.773-1.622
101.272-2.243-1.526-2.206
110.467-0.5530.349-0.887
Standard thresholds
P-value Threshold
0.001 4.61529
0.0005 5.497755
0.0001 7.318975