MotifSTAT3.H12INVIVO.0.P.B
Gene (human)STAT3
(GeneCards)
Gene synonyms (human)APRF
Gene (mouse)Stat3
Gene synonyms (mouse)Aprf
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length13
ConsensusbvbTTCCYRKMAv
GC content48.32%
Information content (bits; total / per base)11.444 / 0.88
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 29 (182) 0.854 0.952 0.779 0.907 0.845 0.939 3.191 4.317 177.663 459.62
Mouse 48 (289) 0.852 0.948 0.743 0.902 0.85 0.948 2.891 4.343 179.481 433.921

rSNP benchmarking, ADASTRA odds-ratio -log-Fisher's P Pearson r Kendall tau
# 10.509 5.377 0.248 0.201
TF superclassImmunoglobulin fold {6} (TFClass)
TF classSTAT domain factors {6.2} (TFClass)
TF familySTAT {6.2.1} (TFClass)
TF subfamily {6.2.1.0} (TFClass)
TFClass IDTFClass: 6.2.1.0.3
HGNCHGNC:11364
MGIMGI:103038
EntrezGene (human)GeneID:6774
(SSTAR profile)
EntrezGene (mouse)GeneID:20848
(SSTAR profile)
UniProt ID (human)STAT3_HUMAN
UniProt ID (mouse)STAT3_MOUSE
UniProt AC (human)P40763
(TFClass)
UniProt AC (mouse)P42227
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 29 human, 48 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01103.0456.0257.0184.0
02390.0221.0241.0148.0
03117.0313.0157.0413.0
047.08.06.0979.0
0513.05.031.0951.0
06140.0818.08.034.0
072.0820.06.0172.0
0812.0592.00.0396.0
09236.023.0722.019.0
1050.030.0709.0211.0
11719.0250.06.025.0
12887.047.033.033.0
13356.0176.0346.0122.0
PFM
ACGT
010.1030.4560.2570.184
020.390.2210.2410.148
030.1170.3130.1570.413
040.0070.0080.0060.979
050.0130.0050.0310.951
060.140.8180.0080.034
070.0020.820.0060.172
080.0120.5920.00.396
090.2360.0230.7220.019
100.050.030.7090.211
110.7190.250.0060.025
120.8870.0470.0330.033
130.3560.1760.3460.122
PWM
ACGT
01-0.8770.5980.027-0.304
020.442-0.122-0.036-0.52
03-0.7520.223-0.4610.499
04-3.362-3.253-3.4841.36
05-2.839-3.622-2.041.331
06-0.5741.181-3.253-1.952
07-4.2131.183-3.484-0.371
08-2.9090.858-4.9820.457
09-0.057-2.321.056-2.497
10-1.582-2.0711.038-0.168
111.0520.0-3.484-2.243
121.261-1.642-1.981-1.981
130.351-0.3480.323-0.71
Standard thresholds
P-value Threshold
0.001 4.33951
0.0005 5.31131
0.0001 7.281275