| Motif | STA5B.H12INVITRO.0.P.D |
| Gene (human) | STAT5B (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Stat5b |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | STA5B.H12INVITRO.0.P.D |
| Gene (human) | STAT5B (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Stat5b |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 13 |
| Consensus | dbTTCYTRGAAhh |
| GC content | 36.38% |
| Information content (bits; total / per base) | 13.455 / 1.035 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 5 (25) | 0.903 | 0.939 | 0.817 | 0.871 | 0.906 | 0.934 | 3.556 | 3.792 | 166.678 | 310.959 |
| Mouse | 18 (114) | 0.917 | 0.962 | 0.847 | 0.923 | 0.926 | 0.967 | 3.842 | 4.455 | 241.883 | 426.569 |
| TF superclass | Immunoglobulin fold {6} (TFClass) |
| TF class | STAT domain factors {6.2} (TFClass) |
| TF family | STAT {6.2.1} (TFClass) |
| TF subfamily | {6.2.1.0} (TFClass) |
| TFClass ID | TFClass: 6.2.1.0.6 |
| HGNC | HGNC:11367 |
| MGI | MGI:103035 |
| EntrezGene (human) | GeneID:6777 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:20851 (SSTAR profile) |
| UniProt ID (human) | STA5B_HUMAN |
| UniProt ID (mouse) | STA5B_MOUSE |
| UniProt AC (human) | P51692 (TFClass) |
| UniProt AC (mouse) | P42232 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 5 human, 18 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | STA5B.H12INVITRO.0.P.D.pcm |
| PWM | STA5B.H12INVITRO.0.P.D.pwm |
| PFM | STA5B.H12INVITRO.0.P.D.pfm |
| Alignment | STA5B.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | STA5B.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | STA5B.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | STA5B.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | STA5B.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 402.0 | 117.0 | 244.0 | 237.0 |
| 02 | 161.0 | 182.0 | 195.0 | 462.0 |
| 03 | 1.0 | 9.0 | 4.0 | 986.0 |
| 04 | 55.0 | 15.0 | 5.0 | 925.0 |
| 05 | 8.0 | 980.0 | 1.0 | 11.0 |
| 06 | 28.0 | 421.0 | 21.0 | 530.0 |
| 07 | 0.0 | 429.0 | 0.0 | 571.0 |
| 08 | 574.0 | 11.0 | 359.0 | 56.0 |
| 09 | 4.0 | 2.0 | 983.0 | 11.0 |
| 10 | 930.0 | 8.0 | 9.0 | 53.0 |
| 11 | 983.0 | 1.0 | 14.0 | 2.0 |
| 12 | 418.0 | 207.0 | 178.0 | 197.0 |
| 13 | 271.0 | 206.0 | 129.0 | 394.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.402 | 0.117 | 0.244 | 0.237 |
| 02 | 0.161 | 0.182 | 0.195 | 0.462 |
| 03 | 0.001 | 0.009 | 0.004 | 0.986 |
| 04 | 0.055 | 0.015 | 0.005 | 0.925 |
| 05 | 0.008 | 0.98 | 0.001 | 0.011 |
| 06 | 0.028 | 0.421 | 0.021 | 0.53 |
| 07 | 0.0 | 0.429 | 0.0 | 0.571 |
| 08 | 0.574 | 0.011 | 0.359 | 0.056 |
| 09 | 0.004 | 0.002 | 0.983 | 0.011 |
| 10 | 0.93 | 0.008 | 0.009 | 0.053 |
| 11 | 0.983 | 0.001 | 0.014 | 0.002 |
| 12 | 0.418 | 0.207 | 0.178 | 0.197 |
| 13 | 0.271 | 0.206 | 0.129 | 0.394 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.472 | -0.752 | -0.024 | -0.053 |
| 02 | -0.436 | -0.315 | -0.247 | 0.611 |
| 03 | -4.525 | -3.156 | -3.783 | 1.367 |
| 04 | -1.49 | -2.711 | -3.622 | 1.303 |
| 05 | -3.253 | 1.361 | -4.525 | -2.985 |
| 06 | -2.136 | 0.518 | -2.405 | 0.748 |
| 07 | -4.982 | 0.537 | -4.982 | 0.822 |
| 08 | 0.827 | -2.985 | 0.36 | -1.473 |
| 09 | -3.783 | -4.213 | 1.364 | -2.985 |
| 10 | 1.309 | -3.253 | -3.156 | -1.526 |
| 11 | 1.364 | -4.525 | -2.773 | -4.213 |
| 12 | 0.511 | -0.187 | -0.337 | -0.236 |
| 13 | 0.08 | -0.192 | -0.655 | 0.452 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.19031 |
| 0.0005 | 4.53516 |
| 0.0001 | 6.83374 |