| Motif | STA5A.H12INVITRO.0.P.D |
| Gene (human) | STAT5A (GeneCards) |
| Gene synonyms (human) | STAT5 |
| Gene (mouse) | Stat5a |
| Gene synonyms (mouse) | Mgf, Mpf |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | STA5A.H12INVITRO.0.P.D |
| Gene (human) | STAT5A (GeneCards) |
| Gene synonyms (human) | STAT5 |
| Gene (mouse) | Stat5a |
| Gene synonyms (mouse) | Mgf, Mpf |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 11 |
| Consensus | TTCYARGAAvh |
| GC content | 38.96% |
| Information content (bits; total / per base) | 13.167 / 1.197 |
| Data sources | ChIP-Seq |
| Aligned words | 1007 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 6 (37) | 0.735 | 0.932 | 0.697 | 0.88 | 0.734 | 0.919 | 2.731 | 3.593 | 149.796 | 304.119 |
| Mouse | 65 (363) | 0.927 | 0.973 | 0.865 | 0.938 | 0.923 | 0.973 | 3.706 | 4.352 | 268.367 | 545.06 |
| TF superclass | Immunoglobulin fold {6} (TFClass) |
| TF class | STAT domain factors {6.2} (TFClass) |
| TF family | STAT {6.2.1} (TFClass) |
| TF subfamily | {6.2.1.0} (TFClass) |
| TFClass ID | TFClass: 6.2.1.0.5 |
| HGNC | HGNC:11366 |
| MGI | MGI:103036 |
| EntrezGene (human) | GeneID:6776 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:20850 (SSTAR profile) |
| UniProt ID (human) | STA5A_HUMAN |
| UniProt ID (mouse) | STA5A_MOUSE |
| UniProt AC (human) | P42229 (TFClass) |
| UniProt AC (mouse) | P42230 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 6 human, 65 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | STA5A.H12INVITRO.0.P.D.pcm |
| PWM | STA5A.H12INVITRO.0.P.D.pwm |
| PFM | STA5A.H12INVITRO.0.P.D.pfm |
| Alignment | STA5A.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | STA5A.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | STA5A.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | STA5A.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | STA5A.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.0 | 21.0 | 0.0 | 984.0 |
| 02 | 38.0 | 11.0 | 10.0 | 948.0 |
| 03 | 5.0 | 1000.0 | 0.0 | 2.0 |
| 04 | 62.0 | 418.0 | 19.0 | 508.0 |
| 05 | 580.0 | 0.0 | 427.0 | 0.0 |
| 06 | 483.0 | 21.0 | 474.0 | 29.0 |
| 07 | 9.0 | 1.0 | 989.0 | 8.0 |
| 08 | 936.0 | 9.0 | 17.0 | 45.0 |
| 09 | 991.0 | 1.0 | 13.0 | 2.0 |
| 10 | 402.0 | 233.0 | 221.0 | 151.0 |
| 11 | 199.0 | 292.0 | 139.0 | 377.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.002 | 0.021 | 0.0 | 0.977 |
| 02 | 0.038 | 0.011 | 0.01 | 0.941 |
| 03 | 0.005 | 0.993 | 0.0 | 0.002 |
| 04 | 0.062 | 0.415 | 0.019 | 0.504 |
| 05 | 0.576 | 0.0 | 0.424 | 0.0 |
| 06 | 0.48 | 0.021 | 0.471 | 0.029 |
| 07 | 0.009 | 0.001 | 0.982 | 0.008 |
| 08 | 0.929 | 0.009 | 0.017 | 0.045 |
| 09 | 0.984 | 0.001 | 0.013 | 0.002 |
| 10 | 0.399 | 0.231 | 0.219 | 0.15 |
| 11 | 0.198 | 0.29 | 0.138 | 0.374 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -4.219 | -2.412 | -4.988 | 1.358 |
| 02 | -1.853 | -2.991 | -3.073 | 1.321 |
| 03 | -3.629 | 1.374 | -4.988 | -4.219 |
| 04 | -1.381 | 0.504 | -2.504 | 0.699 |
| 05 | 0.831 | -4.988 | 0.526 | -4.988 |
| 06 | 0.648 | -2.412 | 0.63 | -2.11 |
| 07 | -3.162 | -4.531 | 1.363 | -3.26 |
| 08 | 1.308 | -3.162 | -2.605 | -1.691 |
| 09 | 1.365 | -4.531 | -2.845 | -4.219 |
| 10 | 0.465 | -0.077 | -0.129 | -0.507 |
| 11 | -0.233 | 0.147 | -0.588 | 0.402 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.26681 |
| 0.0005 | 4.58991 |
| 0.0001 | 6.896695 |